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  5. Msp_g33082

Msp_g33082 (REME1)


Aliases : REME1

Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g33082

Target Alias Description ECC score Gene Family Method Actions
Ala_g11518 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g03503 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g04440 OTP84 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aop_g38453 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Cba_g05963 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g13662 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g77980 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ceric.23G020600.1 Ceric.23G020600 not classified & original description: pacid=50609730... 0.14 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001130.28 No alias No description available 0.01 OrthoFinder output from all 47 species
Dde_g22519 No alias not classified & original description: none 0.12 OrthoFinder output from all 47 species
Msp_g17452 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Msp_g28795 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Msp_g38951 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Ppi_g53925 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Solyc03g116840.3.1 Solyc03g116840 RNA editing factor (OTP81) 0.09 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 304 351
IPR002885 Pentatricopeptide_repeat 405 452
IPR002885 Pentatricopeptide_repeat 177 204
IPR002885 Pentatricopeptide_repeat 478 500
IPR002885 Pentatricopeptide_repeat 205 233
IPR002885 Pentatricopeptide_repeat 278 302
IPR032867 DYW_dom 626 708
No external refs found!