Smo84195 (PACid_15414947)


Aliases : PACid_15414947

Description : 27.3.25 RNA.regulation of transcription.MYB domain transcription factor family Encodes a putative transcription factor (MYB55). myb domain protein 55 (MYB55) CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495) BEST Arabidopsis thaliana protein match is: myb domain protein 61 (TAIR:AT1G09540.1) Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12 Bacteria - 1396 Metazoa - 17338 Fungi - 3422 Plants - 5037 Viruses - 0 Other Eukaryotes - 2996 (source: NCBI BLink). & (loc_os05g04820.1 : 162.0


Gene families : OG_01_0000003 (Gene family) Phylogenetic Tree(s): OG0000003_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Smo84195
Cluster HCCA cluster: Cluster_80

Target Alias Description ECC score Gene Family Method Actions
AT1G16490 MYB58, ATMYB58 myb domain protein 58 0.02 Gene family
AT1G34670 AtMYB93, MYB93 myb domain protein 93 0.02 Gene family
AT1G35515 MYB8, HOS10 high response to osmotic stress 10 0.02 Gene family
AT1G48000 AtMYB112, MYB112 myb domain protein 112 0.03 Gene family
AT2G36890 ATMYB38, MYB38,... Duplicated homeodomain-like superfamily protein 0.04 Gene family
AT3G06490 BOS1, AtMYB108, MYB108 myb domain protein 108 0.02 Gene family
AT3G12720 ATY53, ATMYB67, MYB67 myb domain protein 67 0.03 Gene family
AT3G53200 AtMYB27, MYB27 myb domain protein 27 0.02 Gene family
AT4G01680 MYB55, AtMYB55 myb domain protein 55 0.03 Gene family
AT5G26660 MYB86, ATMYB86 myb domain protein 86 0.02 Gene family
AT5G65790 MYB68, ATMYB68 myb domain protein 68 0.05 Gene family
GSVIVT01003662001 No alias 27.3.25 RNA.regulation of transcription.MYB domain... 0.03 Gene family
GSVIVT01004317001 No alias 27.3.25 RNA.regulation of transcription.MYB domain... 0.03 Gene family
GSVIVT01004851001 No alias 27.3.25 RNA.regulation of transcription.MYB domain... 0.02 Gene family
GSVIVT01008005001 No alias No description available 0.02 Gene family
GSVIVT01009280001 No alias 27.3.25 RNA.regulation of transcription.MYB domain... 0.02 Gene family
GSVIVT01011872001 No alias 27.3.25 RNA.regulation of transcription.MYB domain... 0.02 Gene family
GSVIVT01013126001 No alias 27.3.25 RNA.regulation of transcription.MYB domain... 0.02 Gene family
GSVIVT01014454001 No alias 27.3.25 RNA.regulation of transcription.MYB domain... 0.02 Gene family
GSVIVT01017716001 No alias 27.3.25 RNA.regulation of transcription.MYB domain... 0.1 Gene family
GSVIVT01018577001 No alias 27.3.25 RNA.regulation of transcription.MYB domain... 0.03 Gene family
GSVIVT01023531001 No alias 27.3.25 RNA.regulation of transcription.MYB domain... 0.02 Gene family
GSVIVT01025034001 No alias 27.3.25 RNA.regulation of transcription.MYB domain... 0.02 Gene family
GSVIVT01025269001 No alias 27.3.25 RNA.regulation of transcription.MYB domain... 0.03 Gene family
GSVIVT01028235001 No alias 27.3.25 RNA.regulation of transcription.MYB domain... 0.02 Gene family
GSVIVT01029145001 No alias 27.3.25 RNA.regulation of transcription.MYB domain... 0.02 Gene family
GSVIVT01029904001 No alias No description available 0.02 Gene family
GSVIVT01031341001 No alias 27.3.25 RNA.regulation of transcription.MYB domain... 0.02 Gene family
GSVIVT01032088001 No alias 27.3.25 RNA.regulation of transcription.MYB domain... 0.02 Gene family
GSVIVT01035177001 No alias 27.3.25 RNA.regulation of transcription.MYB domain... 0.02 Gene family
GSVIVT01035332001 No alias 27.3.25 RNA.regulation of transcription.MYB domain... 0.02 Gene family
LOC_Os01g03720 Os01g0128000 27.3.25 RNA.regulation of transcription.MYB domain... 0.02 Gene family
LOC_Os01g09590 Os01g0191900 27.3.25 RNA.regulation of transcription.MYB domain... 0.02 Gene family
LOC_Os01g36460 Os01g0545100 27.3.25 RNA.regulation of transcription.MYB domain... 0.02 Gene family
LOC_Os01g51260 Os01g0709000 27.3.25 RNA.regulation of transcription.MYB domain... 0.02 Gene family
LOC_Os03g19120 No alias No description available 0.04 Gene family
LOC_Os04g45060 Os04g0533200 27.3.25 RNA.regulation of transcription.MYB domain... 0.03 Gene family
LOC_Os06g02250 Os06g0112700 27.3.25 RNA.regulation of transcription.MYB domain... 0.02 Gene family
LOC_Os06g10350 Os06g0205100 No description available 0.02 Gene family
LOC_Os08g33940 Os08g0437300 27.3.25 RNA.regulation of transcription.MYB domain... 0.04 Gene family
LOC_Os08g37970 Os08g0486300 27.3.25 RNA.regulation of transcription.MYB domain... 0.02 Gene family
LOC_Os09g24800 Os09g0414300 27.3.25 RNA.regulation of transcription.MYB domain... 0.02 Gene family
LOC_Os09g36250 Os09g0532900 27.3.25 RNA.regulation of transcription.MYB domain... 0.04 Gene family
LOC_Os09g36730 Os09g0538400 27.3.25 RNA.regulation of transcription.MYB domain... 0.02 Gene family
LOC_Os11g03440 Os11g0128500 No description available 0.03 Gene family
LOC_Os11g45740 Os11g0684000 27.3.25 RNA.regulation of transcription.MYB domain... 0.02 Gene family
LOC_Os12g03150 Os12g0125000 No description available 0.04 Gene family
LOC_Os12g37690 Os12g0564100 27.3.25 RNA.regulation of transcription.MYB domain... 0.02 Gene family
MA_124887g0010 No alias 27.3.25 RNA.regulation of transcription.MYB domain... 0.02 Gene family
MA_139924g0010 No alias 27.3.25 RNA.regulation of transcription.MYB domain... 0.03 Gene family
MA_19163g0010 No alias 27.3.25 RNA.regulation of transcription.MYB domain... 0.02 Gene family
MA_223201g0010 No alias 27.3.25 RNA.regulation of transcription.MYB domain... 0.02 Gene family
MA_24271g0020 No alias 27.3.25 RNA.regulation of transcription.MYB domain... 0.02 Gene family
MA_6393g0010 No alias 27.3.25 RNA.regulation of transcription.MYB domain... 0.02 Gene family
MA_64405g0010 No alias No description available 0.02 Gene family
MA_93127g0010 No alias 27.3.25 RNA.regulation of transcription.MYB domain... 0.02 Gene family
Smo98669 PACid_15415274 27.3.25 RNA.regulation of transcription.MYB domain... 0.03 Gene family
Solyc02g089190.2.1 Solyc02g089190.2 27.3.25 RNA.regulation of transcription.MYB domain... 0.02 Gene family
Solyc03g025870.3.1 Solyc03g025870.3 27.3.25 RNA.regulation of transcription.MYB domain... 0.02 Gene family
Solyc04g056310.3.1 Solyc04g056310.3 27.3.25 RNA.regulation of transcription.MYB domain... 0.02 Gene family
Solyc05g007690.2.1 Solyc05g007690.2 27.3.25 RNA.regulation of transcription.MYB domain... 0.03 Gene family
Solyc05g007710.3.1 Solyc05g007710.3 27.3.25 RNA.regulation of transcription.MYB domain... 0.04 Gene family
Solyc05g008250.2.1 Solyc05g008250.2 No description available 0.06 Gene family
Solyc05g009230.2.1 Solyc05g009230.2 27.3.25 RNA.regulation of transcription.MYB domain... 0.02 Gene family
Solyc05g048830.3.1 Solyc05g048830.3 27.3.25 RNA.regulation of transcription.MYB domain... 0.02 Gene family
Solyc05g055030.2.1 Solyc05g055030.2 27.3.25 RNA.regulation of transcription.MYB domain... 0.02 Gene family
Solyc06g074910.3.1 Solyc06g074910.3 27.3.25 RNA.regulation of transcription.MYB domain... 0.03 Gene family
Solyc07g006750.3.1 Solyc07g006750.3 27.3.25 RNA.regulation of transcription.MYB domain... 0.02 Gene family
Solyc08g076700.1.1 Solyc08g076700.1 27.3.25 RNA.regulation of transcription.MYB domain... 0.02 Gene family
Solyc09g090130.3.1 Solyc09g090130.3 27.3.25 RNA.regulation of transcription.MYB domain... 0.03 Gene family
Solyc09g090790.3.1 Solyc09g090790.3 27.3.25 RNA.regulation of transcription.MYB domain... 0.03 Gene family
Solyc10g005460.3.1 Solyc10g005460.3 27.3.25 RNA.regulation of transcription.MYB domain... 0.02 Gene family
Solyc10g081490.2.1 Solyc10g081490.2 No description available 0.02 Gene family
Zm00001d002476 GRMZM2G038722 27.3.25 RNA.regulation of transcription.MYB domain... 0.03 Gene family
Zm00001d005307 GRMZM2G090837 27.3.25 RNA.regulation of transcription.MYB domain... 0.02 Gene family
Zm00001d005760 No alias 27.3.25 RNA.regulation of transcription.MYB domain... 0.02 Gene family
Zm00001d008528 GRMZM2G096358 27.3.25 RNA.regulation of transcription.MYB domain... 0.02 Gene family
Zm00001d018097 GRMZM2G159547 27.3.25 RNA.regulation of transcription.MYB domain... 0.02 Gene family
Zm00001d018320 GRMZM5G848185 No description available 0.02 Gene family
Zm00001d020405 GRMZM2G169356 27.3.25 RNA.regulation of transcription.MYB domain... 0.04 Gene family
Zm00001d021296 GRMZM2G104551 27.3.25 RNA.regulation of transcription.MYB domain... 0.02 Gene family
Zm00001d023282 No alias 27.3.25 RNA.regulation of transcription.MYB domain... 0.02 Gene family
Zm00001d026197 GRMZM2G081557 27.3.25 RNA.regulation of transcription.MYB domain... 0.02 Gene family
Zm00001d028777 GRMZM2G308034 27.3.25 RNA.regulation of transcription.MYB domain... 0.02 Gene family
Zm00001d030644 GRMZM2G143046 27.3.25 RNA.regulation of transcription.MYB domain... 0.02 Gene family
Zm00001d034207 No alias 27.3.25 RNA.regulation of transcription.MYB domain... 0.03 Gene family
Zm00001d044107 GRMZM2G143328 27.3.25 RNA.regulation of transcription.MYB domain... 0.02 Gene family
Zm00001d051788 GRMZM2G055158 27.3.25 RNA.regulation of transcription.MYB domain... 0.02 Gene family
Zm00001d052804 GRMZM2G017268 27.3.25 RNA.regulation of transcription.MYB domain... 0.02 Gene family
Zm00001d053124 GRMZM2G108959 No description available 0.02 Gene family

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001005 SANT/Myb 14 61
No external refs found!