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  5. Msp_g32329

Msp_g32329


Description : not classified & original description: none


Gene families : OG0000043 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g32329

Target Alias Description ECC score Gene Family Method Actions
Ala_g07513 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g24243 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g33378 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07076 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g19037 MEF22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g54567 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g27300 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g21145 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g26474 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g31319 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0004.g008666 No alias not classified & original description: CDS=1-2997 0.04 OrthoFinder output from all 47 species
Azfi_s0131.g049164 No alias not classified & original description: CDS=1-2763 0.02 OrthoFinder output from all 47 species
Azfi_s0250.g060258 No alias not classified & original description: CDS=1-1893 0.02 OrthoFinder output from all 47 species
Azfi_s0345.g065805 No alias not classified & original description: CDS=1-2679 0.02 OrthoFinder output from all 47 species
Azfi_s0469.g072874 CRR22 not classified & original description: CDS=1-1206 0.02 OrthoFinder output from all 47 species
Azfi_s1399.g102577 No alias not classified & original description: CDS=1-951 0.02 OrthoFinder output from all 47 species
Cba_g06407 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g07638 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g07704 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g07734 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g10259 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g34890 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g67887 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g67893 CRR22 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g75406 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.06G051200.1 CRR22, Ceric.06G051200 not classified & original description: pacid=50620844... 0.04 OrthoFinder output from all 47 species
Ceric.11G091700.1 Ceric.11G091700 ssDNA-binding protein *(OSB) & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.18G038700.1 Ceric.18G038700 not classified & original description: pacid=50621594... 0.03 OrthoFinder output from all 47 species
Ceric.18G062200.1 Ceric.18G062200 not classified & original description: pacid=50622099... 0.04 OrthoFinder output from all 47 species
Ceric.21G077300.1 Ceric.21G077300 not classified & original description: pacid=50604263... 0.04 OrthoFinder output from all 47 species
Ceric.23G032200.1 Ceric.23G032200 not classified & original description: pacid=50610511... 0.05 OrthoFinder output from all 47 species
Ceric.23G037900.1 Ceric.23G037900 not classified & original description: pacid=50609724... 0.04 OrthoFinder output from all 47 species
Ceric.25G001500.1 Ceric.25G001500 not classified & original description: pacid=50593180... 0.03 OrthoFinder output from all 47 species
Ceric.37G043200.1 Ceric.37G043200 not classified & original description: pacid=50616612... 0.02 OrthoFinder output from all 47 species
Dac_g11875 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g31479 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g06991 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18312 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g04282 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g05695 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g38703 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g03795 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g17001 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g18405 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g25433 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g39340 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g03867 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g33159 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0007.g003705 No alias not classified & original description: CDS=1-1233 0.03 OrthoFinder output from all 47 species
Sam_g17285 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g18632 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g24539 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g40247 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g04449 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g06220 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g30946 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g02887 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g09995 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g40520 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006520 amino acid metabolic process IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0016743 carboxyl- or carbamoyltransferase activity IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 288 308
IPR002885 Pentatricopeptide_repeat 199 229
IPR002885 Pentatricopeptide_repeat 850 875
IPR002885 Pentatricopeptide_repeat 533 555
IPR002885 Pentatricopeptide_repeat 676 721
IPR002885 Pentatricopeptide_repeat 559 605
IPR002885 Pentatricopeptide_repeat 775 822
IPR002885 Pentatricopeptide_repeat 96 143
IPR002885 Pentatricopeptide_repeat 314 361
No external refs found!