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  5. Msp_g32314

Msp_g32314


Description : not classified & original description: none


Gene families : OG0001235 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001235_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g32314

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00063p00161200 LRP1,... RNA biosynthesis.transcriptional activation.SRS... 0.02 OrthoFinder output from all 47 species
AT5G12330 LRP1 Lateral root primordium (LRP) protein-related 0.03 OrthoFinder output from all 47 species
Adi_g058361 SHI SRS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g058362 SHI SRS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g061023 SHI SRS-type transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Adi_g079607 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.02G095600.1 SHI, Ceric.02G095600 SRS-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.14G028100.1 SRS1, STY1,... SRS-type transcription factor & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.25G035200.1 SRS1, STY1,... SRS-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.32G058400.1 SRS1, STY1,... SRS-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Dde_g47477 SHI SRS-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01009812001 SRS5 RNA biosynthesis.transcriptional activation.SRS... 0.04 OrthoFinder output from all 47 species
Tin_g29778 SRS1, STY1 SRS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e028304_P001 LRP1, Zm00001e028304 transcription factor (SRS) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004097 catechol oxidase activity IEP HCCA
MF GO:0004312 fatty acid synthase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
MF GO:0009922 fatty acid elongase activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP HCCA
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!