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  5. Msp_g32262

Msp_g32262


Description : UMF23-type solute transporter & original description: none


Gene families : OG0000069 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000069_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g32262

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00241480 evm_27.TU.AmTr_v1... Protein NUCLEAR FUSION DEFECTIVE 4 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00013p00060560 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AMTR_s00041p00157100 evm_27.TU.AmTr_v1... Protein NUCLEAR FUSION DEFECTIVE 4 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
Adi_g026166 No alias UMF23-type solute transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g06102 No alias UMF23-type solute transporter & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g02063 No alias UMF23-type solute transporter & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g09070 No alias UMF23-type solute transporter & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g16025 No alias UMF23-type solute transporter & original description: none 0.04 OrthoFinder output from all 47 species
Als_g20049 No alias UMF23-type solute transporter & original description: none 0.05 OrthoFinder output from all 47 species
Als_g30302 No alias UMF23-type solute transporter & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g15309 No alias UMF23-type solute transporter & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g16863 No alias UMF23-type solute transporter & original description: none 0.09 OrthoFinder output from all 47 species
Aob_g24388 No alias UMF23-type solute transporter & original description: none 0.06 OrthoFinder output from all 47 species
Aob_g42564 No alias UMF23-type solute transporter & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g62007 No alias UMF23-type solute transporter & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g69296 No alias UMF23-type solute transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene19931.t1 Aspi01Gene19931 UMF23-type solute transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene21549.t1 Aspi01Gene21549 UMF23-type solute transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene40218.t1 Aspi01Gene40218 UMF23-type solute transporter & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene65248.t2 Aspi01Gene65248 UMF23-type solute transporter & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g17163 No alias UMF23-type solute transporter & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g27964 No alias UMF23-type solute transporter & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g39991 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ehy_g09132 No alias UMF23-type solute transporter & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01016196001 No alias Protein NUCLEAR FUSION DEFECTIVE 4 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01031480001 No alias Protein NUCLEAR FUSION DEFECTIVE 4 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
GSVIVT01033667001 No alias Protein NUCLEAR FUSION DEFECTIVE 4 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Gb_41719 No alias anion transporter (Fabaceae-N70) 0.04 OrthoFinder output from all 47 species
LOC_Os01g61010.1 LOC_Os01g61010 anion transporter (Fabaceae-N70) 0.05 OrthoFinder output from all 47 species
LOC_Os03g47810.1 LOC_Os03g47810 anion transporter (Fabaceae-N70) 0.04 OrthoFinder output from all 47 species
LOC_Os05g39800.1 LOC_Os05g39800 anion transporter (Fabaceae-N70) 0.03 OrthoFinder output from all 47 species
LOC_Os08g42010.1 LOC_Os08g42010 anion transporter (Fabaceae-N70) 0.03 OrthoFinder output from all 47 species
LOC_Os09g36600.1 LOC_Os09g36600 anion transporter (Fabaceae-N70) 0.03 OrthoFinder output from all 47 species
LOC_Os12g44060.1 LOC_Os12g44060 anion transporter (Fabaceae-N70) 0.04 OrthoFinder output from all 47 species
Len_g37799 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g41230 No alias UMF23-type solute transporter & original description: none 0.04 OrthoFinder output from all 47 species
Len_g55671 No alias UMF23-type solute transporter & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g05645 No alias UMF23-type solute transporter & original description: none 0.03 OrthoFinder output from all 47 species
MA_10436015g0010 No alias Protein NUCLEAR FUSION DEFECTIVE 4 OS=Arabidopsis... 0.07 OrthoFinder output from all 47 species
MA_256013g0010 NFD4 anion transporter (Fabaceae-N70) 0.03 OrthoFinder output from all 47 species
MA_6723g0010 No alias anion transporter (Fabaceae-N70) 0.02 OrthoFinder output from all 47 species
Mp2g06490.1 No alias anion transporter (Fabaceae-N70) 0.02 OrthoFinder output from all 47 species
Msp_g00648 No alias UMF23-type solute transporter & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g26675 No alias UMF23-type solute transporter & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g40202 No alias UMF23-type solute transporter & original description: none 0.07 OrthoFinder output from all 47 species
Ppi_g10746 No alias UMF23-type solute transporter & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g29994 No alias UMF23-type solute transporter & original description: none 0.06 OrthoFinder output from all 47 species
Sam_g28803 No alias UMF23-type solute transporter & original description: none 0.04 OrthoFinder output from all 47 species
Smo166510 No alias Protein NUCLEAR FUSION DEFECTIVE 4 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Smo266544 No alias Protein NUCLEAR FUSION DEFECTIVE 4 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Solyc06g011590.3.1 Solyc06g011590 anion transporter (Fabaceae-N70) 0.02 OrthoFinder output from all 47 species
Solyc07g007340.3.1 Solyc07g007340 anion transporter (Fabaceae-N70) 0.03 OrthoFinder output from all 47 species
Spa_g37932 No alias UMF23-type solute transporter & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g38606 No alias UMF23-type solute transporter & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g56826 No alias UMF23-type solute transporter & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g16333 No alias UMF23-type solute transporter & original description: none 0.08 OrthoFinder output from all 47 species
Zm00001e003676_P002 Zm00001e003676 anion transporter (Fabaceae-N70) 0.02 OrthoFinder output from all 47 species
Zm00001e005267_P001 Zm00001e005267 anion transporter (Fabaceae-N70) 0.04 OrthoFinder output from all 47 species
Zm00001e006026_P001 Zm00001e006026 anion transporter (Fabaceae-N70) 0.05 OrthoFinder output from all 47 species
Zm00001e011367_P001 Zm00001e011367 anion transporter (Fabaceae-N70) 0.01 OrthoFinder output from all 47 species
Zm00001e028836_P002 Zm00001e028836 anion transporter (Fabaceae-N70) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR010658 Nodulin-like 18 262
No external refs found!