Smo83841 (PACid_15417194)


Aliases : PACid_15417194

Description : 30.3 signalling.calcium encodes a calmodulin that is involved in thigmomorphogenesis. Gene expression is rapidly induced upon a variety of abiotic stimuli, including water spray, subirrigation, wind, touch, wounding, or darkness. calmodulin 1 (CAM1) CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand (InterPro:IPR018248) BEST Arabidopsis thaliana protein match is: calmodulin 4 (TAIR:AT1G66410.1) Has 29914 Blast hits to 22079 proteins in 1723 species: Archae - 3 Bacteria - 127 Metazoa - 13080 Fungi - 6590 Plants - 6083 Viruses - 0 Other Eukaryotes - 4031 (source: NCBI BLink). & (chl4|521030 : 218.0


Gene families : OG_01_0000164 (Gene family) Phylogenetic Tree(s): OG0000164_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Smo83841
Cluster HCCA cluster: Cluster_103

Target Alias Description ECC score Gene Family Method Actions
Cre03.g150300 No alias 30.3 signalling.calcium Encodes a calmodulin isoform.... 0.01 Gene family
Solyc01g008950.3.1 Solyc01g008950.3 30.3 signalling.calcium EF hand domain protein encodes a... 0.03 Gene family
Solyc11g072270.2.1 Solyc11g072270.2 29.4 protein.postranslational modification... 0.02 Gene family

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002048 EF_hand_dom 87 150
No external refs found!