Msp_g31889

Description : transcription factor *(DOF) & original description: none

Gene families : OG0000067 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000067_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Msp_g31889

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00012p00176640	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.C2C2...	0.04	OrthoFinder output from all 47 species
AT2G46590	DAG2	Dof-type zinc finger DNA-binding family protein	0.03	OrthoFinder output from all 47 species
AT4G24060	No alias	Dof-type zinc finger DNA-binding family protein	0.03	OrthoFinder output from all 47 species
AT5G60200	TMO6	TARGET OF MONOPTEROS 6	0.04	OrthoFinder output from all 47 species
Ala_g06838	DAG1	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Ala_g11580	No alias	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Ala_g13677	CDF2	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Ala_g16400	TMO6	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Als_g28312	TMO6	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Aob_g14979	TMO6	transcription factor *(DOF) & original description: none	0.04	OrthoFinder output from all 47 species
Aop_g09379	No alias	transcription factor *(DOF) & original description: none	0.04	OrthoFinder output from all 47 species
Aop_g25388	TMO6	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene43236.t1	TMO6, Aspi01Gene43236	transcription factor *(DOF) & original description: none	0.04	OrthoFinder output from all 47 species
Aspi01Gene44031.t1	Aspi01Gene44031	transcription factor *(DOF) & original description: none	0.04	OrthoFinder output from all 47 species
Aspi01Gene53704.t2	ADOF1, DOF1,...	transcription factor *(DOF) & original description: none	0.04	OrthoFinder output from all 47 species
Azfi_s0166.g054411	No alias	transcription factor *(DOF) & original description: CDS=29-1513	0.03	OrthoFinder output from all 47 species
Cba_g34327	TMO6	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Cba_g72531	CDF2	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Ceric.24G054400.1	Ceric.24G054400	transcription factor *(DOF) & original description:...	0.03	OrthoFinder output from all 47 species
Dde_g26026	No alias	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g18747	No alias	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01008156001	OBP4	RNA biosynthesis.transcriptional activation.C2C2...	0.02	OrthoFinder output from all 47 species
GSVIVT01021086001	No alias	RNA biosynthesis.transcriptional activation.C2C2...	0.03	OrthoFinder output from all 47 species
GSVIVT01024986001	No alias	RNA biosynthesis.transcriptional activation.C2C2...	0.02	OrthoFinder output from all 47 species
Gb_20144	HCA2, DOF5.6	transcription factor (DOF)	0.03	OrthoFinder output from all 47 species
LOC_Os03g55610.1	ADOF2, DOF2,...	transcription factor (DOF)	0.04	OrthoFinder output from all 47 species
Msp_g10170	OBP4	transcription factor *(DOF) & original description: none	0.05	OrthoFinder output from all 47 species
Ore_g33176	No alias	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Ore_g33574	TMO6	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g44057	CDF3	transcription factor *(DOF) & original description: none	0.04	OrthoFinder output from all 47 species
Pir_g10327	No alias	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g10735	OBP3	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0022.g008715	TMO6	transcription factor *(DOF) & original description: CDS=1-1413	0.03	OrthoFinder output from all 47 species
Sam_g50151	No alias	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Solyc02g077950.3.1	Solyc02g077950	transcription factor (DOF)	0.02	OrthoFinder output from all 47 species
Solyc03g112930.3.1	HCA2, DOF5.6,...	transcription factor (DOF)	0.03	OrthoFinder output from all 47 species
Solyc05g054510.2.1	OBP3, Solyc05g054510	transcription factor (DOF)	0.02	OrthoFinder output from all 47 species
Tin_g01918	OBP4	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e005785_P001	ADOF2, DOF2,...	transcription factor (DOF)	0.02	OrthoFinder output from all 47 species
Zm00001e015414_P004	Zm00001e015414	transcription factor (DOF)	0.03	OrthoFinder output from all 47 species
Zm00001e015597_P001	HCA2, DOF5.6,...	transcription factor (DOF)	0.03	OrthoFinder output from all 47 species
Zm00001e023218_P004	Zm00001e023218	transcription factor (DOF)	0.03	OrthoFinder output from all 47 species
Zm00001e027634_P002	OBP3, Zm00001e027634	transcription factor (DOF)	0.04	OrthoFinder output from all 47 species
Zm00001e041444_P001	Zm00001e041444	transcription factor (DOF)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003824	catalytic activity	IEP	HCCA
MF	GO:0004672	protein kinase activity	IEP	HCCA
MF	GO:0005524	ATP binding	IEP	HCCA
CC	GO:0005759	mitochondrial matrix	IEP	HCCA
BP	GO:0006396	RNA processing	IEP	HCCA
BP	GO:0006468	protein phosphorylation	IEP	HCCA
BP	GO:0006793	phosphorus metabolic process	IEP	HCCA
BP	GO:0006796	phosphate-containing compound metabolic process	IEP	HCCA
BP	GO:0006807	nitrogen compound metabolic process	IEP	HCCA
MF	GO:0008168	methyltransferase activity	IEP	HCCA
MF	GO:0008173	RNA methyltransferase activity	IEP	HCCA
MF	GO:0016301	kinase activity	IEP	HCCA
BP	GO:0016310	phosphorylation	IEP	HCCA
MF	GO:0016740	transferase activity	IEP	HCCA
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	IEP	HCCA
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	IEP	HCCA
MF	GO:0030554	adenyl nucleotide binding	IEP	HCCA
CC	GO:0031974	membrane-enclosed lumen	IEP	HCCA
MF	GO:0032559	adenyl ribonucleotide binding	IEP	HCCA
BP	GO:0036211	protein modification process	IEP	HCCA
BP	GO:0043170	macromolecule metabolic process	IEP	HCCA
CC	GO:0043233	organelle lumen	IEP	HCCA
BP	GO:0043412	macromolecule modification	IEP	HCCA
BP	GO:0044237	cellular metabolic process	IEP	HCCA
BP	GO:0044238	primary metabolic process	IEP	HCCA
CC	GO:0070013	intracellular organelle lumen	IEP	HCCA
BP	GO:0071704	organic substance metabolic process	IEP	HCCA
MF	GO:0140096	catalytic activity, acting on a protein	IEP	HCCA
MF	GO:0140098	catalytic activity, acting on RNA	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003851	Znf_Dof	12	69

External Links

No external refs found!

Msp_g31889

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation