Msp_g31479


Description : not classified & original description: none


Gene families : OG0002519 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002519_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g31479
Cluster HCCA: Cluster_4

Target Alias Description ECC score Gene Family Method Actions
AT1G13130 No alias Cellulase (glycosyl hydrolase family 5) protein 0.05 OrthoFinder output from all 47 species
AT3G26140 No alias Cellulase (glycosyl hydrolase family 5) protein 0.04 OrthoFinder output from all 47 species
AT5G17500 No alias Glycosyl hydrolase superfamily protein 0.03 OrthoFinder output from all 47 species
Als_g61703 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g33174 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene61996.t1 Aspi01Gene61996 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0349.g066500 No alias not classified & original description: CDS=1-1677 0.03 OrthoFinder output from all 47 species
Ceric.21G063600.1 Ceric.21G063600 not classified & original description: pacid=50603932... 0.12 OrthoFinder output from all 47 species
Dac_g14755 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Dcu_g01667 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g47060 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Ehy_g05838 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01019433001 No alias No description available 0.02 OrthoFinder output from all 47 species
GSVIVT01019434001 No alias No description available 0.02 OrthoFinder output from all 47 species
GSVIVT01019436001 No alias No description available 0.03 OrthoFinder output from all 47 species
Gb_13276 No alias no description available(sp|c0hla0|gh5fp_chaob : 569.0) 0.03 OrthoFinder output from all 47 species
Gb_20519 No alias no description available(sp|c0hla0|gh5fp_chaob : 178.0) 0.07 OrthoFinder output from all 47 species
Gb_32318 No alias no description available(sp|c0hla0|gh5fp_chaob : 470.0) 0.06 OrthoFinder output from all 47 species
LOC_Os02g38260.1 LOC_Os02g38260 no description available(sp|c0hla0|gh5fp_chaob : 355.0) 0.04 OrthoFinder output from all 47 species
Len_g14860 No alias not classified & original description: none 0.16 OrthoFinder output from all 47 species
Lfl_g15893 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Lfl_g15991 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_4391326g0010 No alias no description available(sp|c0hla0|gh5fp_chaob : 81.3) 0.03 OrthoFinder output from all 47 species
MA_8507901g0010 No alias no description available(sp|c0hla0|gh5fp_chaob : 513.0) 0.02 OrthoFinder output from all 47 species
MA_8745755g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Nbi_g10993 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g09746 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g28062 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc08g081720.4.1 Solyc08g081720 no description available(sp|c0hla0|gh5fp_chaob : 383.0) 0.02 OrthoFinder output from all 47 species
Spa_g31249 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Tin_g09265 No alias not classified & original description: none 0.15 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003968 RNA-dependent RNA polymerase activity IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
MF GO:0005199 structural constituent of cell wall IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
BP GO:0009664 plant-type cell wall organization IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
BP GO:0071669 plant-type cell wall organization or biogenesis IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!