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  5. Msp_g31396

Msp_g31396


Description : E3 ubiquitin ligase & original description: none


Gene families : OG0000370 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000370_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g31396

Target Alias Description ECC score Gene Family Method Actions
Aop_g11181 No alias E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g05081 No alias E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g47525 No alias E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g17220 No alias E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Gb_38414 No alias RING-v-class E3 ligase 0.03 OrthoFinder output from all 47 species
LOC_Os05g28730.1 LOC_Os05g28730 RING-v-class E3 ligase 0.04 OrthoFinder output from all 47 species
Ore_g17216 No alias E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0033.g010979 No alias E3 ubiquitin ligase & original description: CDS=450-1109 0.04 OrthoFinder output from all 47 species
Zm00001e025697_P001 Zm00001e025697 RING-v-class E3 ligase 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR022143 DUF3675 147 268
IPR011016 Znf_RING-CH 94 140
No external refs found!