Description : not classified & original description: none
Gene families : OG0000613 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000613_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00135p00094440 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At5g09450,... | 0.03 | OrthoFinder output from all 47 species | |
AT1G15480 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.05 | OrthoFinder output from all 47 species | |
AT3G15590 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.06 | OrthoFinder output from all 47 species | |
Aev_g28661 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ala_g07362 | No alias | RNA editing factor *(POCO) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ceric.31G052700.1 | Ceric.31G052700 | RNA editing factor *(POCO) & original description:... | 0.06 | OrthoFinder output from all 47 species | |
GSVIVT01020533001 | No alias | Pentatricopeptide repeat-containing protein At2g20710,... | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01020534001 | No alias | Pentatricopeptide repeat-containing protein At2g20710,... | 0.04 | OrthoFinder output from all 47 species | |
Gb_03507 | No alias | Pentatricopeptide repeat-containing protein At4g02820,... | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os01g17320.1 | PPR596, LOC_Os01g17320 | RNA editing factor (POCO) | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os01g19529.1 | LOC_Os01g19529 | Pentatricopeptide repeat-containing protein At1g02370,... | 0.04 | OrthoFinder output from all 47 species | |
LOC_Os02g55310.1 | LOC_Os02g55310 | Pentatricopeptide repeat-containing protein At5g27460... | 0.08 | OrthoFinder output from all 47 species | |
LOC_Os10g35730.1 | LOC_Os10g35730 | Pentatricopeptide repeat-containing protein At4g02820,... | 0.06 | OrthoFinder output from all 47 species | |
LOC_Os10g35760.2 | LOC_Os10g35760 | Pentatricopeptide repeat-containing protein At2g20710,... | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os12g34340.1 | LOC_Os12g34340 | Pentatricopeptide repeat-containing protein At4g02820,... | 0.02 | OrthoFinder output from all 47 species | |
Len_g37557 | No alias | RNA editing factor *(POCO) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Lfl_g07782 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
MA_10431989g0010 | No alias | RNA editing factor (POCO) | 0.02 | OrthoFinder output from all 47 species | |
MA_128872g0020 | No alias | Pentatricopeptide repeat-containing protein At1g02150... | 0.03 | OrthoFinder output from all 47 species | |
MA_170161g0010 | No alias | Pentatricopeptide repeat-containing protein At1g60770... | 0.02 | OrthoFinder output from all 47 species | |
MA_29806g0010 | No alias | Pentatricopeptide repeat-containing protein At1g60770... | 0.02 | OrthoFinder output from all 47 species | |
MA_9997953g0010 | No alias | Pentatricopeptide repeat-containing protein At1g60770... | 0.02 | OrthoFinder output from all 47 species | |
Pir_g25307 | PPR596 | RNA editing factor *(POCO) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Smo412643 | No alias | Pentatricopeptide repeat-containing protein At1g07590,... | 0.04 | OrthoFinder output from all 47 species | |
Smo413483 | No alias | Pentatricopeptide repeat-containing protein At1g80270,... | 0.04 | OrthoFinder output from all 47 species | |
Smo416459 | No alias | Pentatricopeptide repeat-containing protein At1g80270,... | 0.03 | OrthoFinder output from all 47 species | |
Smo420704 | No alias | Pentatricopeptide repeat-containing protein At1g80270,... | 0.02 | OrthoFinder output from all 47 species | |
Solyc01g079320.4.1 | Solyc01g079320 | Pentatricopeptide repeat-containing protein At1g02370,... | 0.02 | OrthoFinder output from all 47 species | |
Solyc01g081320.4.1 | Solyc01g081320 | Pentatricopeptide repeat-containing protein At5g27460... | 0.02 | OrthoFinder output from all 47 species | |
Solyc07g054090.3.1 | Solyc07g054090 | Pentatricopeptide repeat-containing protein At2g20710,... | 0.02 | OrthoFinder output from all 47 species | |
Tin_g37476 | No alias | not classified & original description: none | 0.07 | OrthoFinder output from all 47 species | |
Zm00001e012594_P001 | Zm00001e012594 | Pentatricopeptide repeat-containing protein At4g21705,... | 0.05 | OrthoFinder output from all 47 species | |
Zm00001e036620_P001 | Zm00001e036620 | Pentatricopeptide repeat-containing protein At1g60770... | 0.01 | OrthoFinder output from all 47 species | |
Zm00001e039746_P002 | Zm00001e039746 | Pentatricopeptide repeat-containing protein At4g02820,... | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000012 | single strand break repair | IEP | HCCA |
MF | GO:0003677 | DNA binding | IEP | HCCA |
MF | GO:0003684 | damaged DNA binding | IEP | HCCA |
MF | GO:0005488 | binding | IEP | HCCA |
CC | GO:0005634 | nucleus | IEP | HCCA |
BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
BP | GO:0006259 | DNA metabolic process | IEP | HCCA |
BP | GO:0006281 | DNA repair | IEP | HCCA |
BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
BP | GO:0006950 | response to stress | IEP | HCCA |
BP | GO:0006974 | cellular response to DNA damage stimulus | IEP | HCCA |
BP | GO:0033554 | cellular response to stress | IEP | HCCA |
CC | GO:0043226 | organelle | IEP | HCCA |
CC | GO:0043227 | membrane-bounded organelle | IEP | HCCA |
CC | GO:0043229 | intracellular organelle | IEP | HCCA |
CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | HCCA |
BP | GO:0044260 | cellular macromolecule metabolic process | IEP | HCCA |
BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
BP | GO:0050896 | response to stimulus | IEP | HCCA |
BP | GO:0051716 | cellular response to stimulus | IEP | HCCA |
BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
No InterPro domains available for this sequence
No external refs found! |