Msp_g30893


Description : not classified & original description: none


Gene families : OG0000236 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000236_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g30893
Cluster HCCA: Cluster_116

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00106p00150110 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
Adi_g115514 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g13273 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0064.g035514 No alias not classified & original description: CDS=742-2646 0.03 OrthoFinder output from all 47 species
Cba_g03959 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.02G060000.1 Ceric.02G060000 not classified & original description: pacid=50584416... 0.03 OrthoFinder output from all 47 species
Ceric.20G014100.1 Ceric.20G014100 not classified & original description: pacid=50566742... 0.04 OrthoFinder output from all 47 species
Dac_g12477 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g13842 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g23842 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g08174 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os01g05480.3 LOC_Os01g05480 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os03g13130.2 LOC_Os03g13130 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os06g49060.1 LOC_Os06g49060 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os09g28850.1 LOC_Os09g28850 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Lfl_g27106 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_124933g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_19648g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp1g27890.1 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Nbi_g07704 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g05228 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g22714 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g62402 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g35283 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g109270.3.1 Solyc01g109270 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Spa_g14701 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g26920 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g29415 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e002322_P002 Zm00001e002322 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e005808_P001 Zm00001e005808 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e013087_P001 Zm00001e013087 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
InterPro domains Description Start Stop
IPR025757 MIP1_Leuzipper 72 150
No external refs found!