Msp_g30873


Description : not classified & original description: none


Gene families : OG0000473 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000473_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g30873

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00005p00176760 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
Adi_g077260 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aev_g40517 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g16926 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aob_g02603 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g02715 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g15938 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.19G032900.1 Ceric.19G032900 not classified & original description: pacid=50575324... 0.04 OrthoFinder output from all 47 species
Ceric.30G074200.1 Ceric.30G074200 not classified & original description: pacid=50608798... 0.05 OrthoFinder output from all 47 species
Ceric.37G005100.1 Ceric.37G005100 not classified & original description: pacid=50616791... 0.06 OrthoFinder output from all 47 species
Len_g19919 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Mp6g01060.1 No alias Membrane protein PM19L OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
Nbi_g04580 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0101.g019776 No alias not classified & original description: CDS=123-641 0.02 OrthoFinder output from all 47 species
Spa_g02439 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g29733 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g12556 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016759 cellulose synthase activity IEP HCCA
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP HCCA
BP GO:0030243 cellulose metabolic process IEP HCCA
BP GO:0030244 cellulose biosynthetic process IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR008390 AWPM-19 16 139
No external refs found!