AMTR_s00018p00245180 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00018.155

Description : Lipid metabolism.fatty acid synthesis.fatty acid desaturation and elongation.fatty acid elongation.fatty acid elongation complex.KCS 3-ketoacyl-CoA synthase


Gene families : OG_01_0000123 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000123_tree ,
OG_02_0000139 (LandPlants) Phylogenetic Tree(s): OG_02_0000139_tree ,
OG_03_0000189 (SeedPlants) Phylogenetic Tree(s): OG_03_0000189_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00018p00245180
Cluster HCCA: Cluster_77

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00034p00045070 evm_27.TU.AmTr_v1... Lipid metabolism.fatty acid synthesis.fatty acid... 0.03 Archaeplastida
AMTR_s00079p00192440 evm_27.TU.AmTr_v1... Lipid metabolism.fatty acid synthesis.fatty acid... 0.04 Archaeplastida
AMTR_s00126p00068780 evm_27.TU.AmTr_v1... Lipid metabolism.fatty acid synthesis.fatty acid... 0.04 Archaeplastida
AT1G01120 KCS1 3-ketoacyl-CoA synthase 1 0.02 Archaeplastida
AT1G04220 KCS2 3-ketoacyl-CoA synthase 2 0.02 Archaeplastida
AT1G07720 KCS3 3-ketoacyl-CoA synthase 3 0.03 Archaeplastida
AT1G68530 G2, POP1, KCS6,... 3-ketoacyl-CoA synthase 6 0.03 Archaeplastida
AT2G26250 KCS10, FDH 3-ketoacyl-CoA synthase 10 0.03 Archaeplastida
AT2G28630 KCS12 3-ketoacyl-CoA synthase 12 0.02 Archaeplastida
AT5G43760 KCS20 3-ketoacyl-CoA synthase 20 0.02 Archaeplastida
GSVIVT01022919001 No alias Lipid metabolism.fatty acid synthesis.fatty acid... 0.03 Archaeplastida
GSVIVT01026270001 No alias Lipid metabolism.fatty acid synthesis.fatty acid... 0.03 Archaeplastida
GSVIVT01034244001 No alias Lipid metabolism.fatty acid synthesis.fatty acid... 0.03 Archaeplastida
GSVIVT01035504001 No alias Lipid metabolism.fatty acid synthesis.fatty acid... 0.02 Archaeplastida
Gb_05331 No alias 3-ketoacyl-CoA synthase (KCS) 0.03 Archaeplastida
Gb_27864 No alias 3-ketoacyl-CoA synthase (KCS) 0.03 Archaeplastida
Gb_32625 No alias 3-ketoacyl-CoA synthase (KCS) 0.03 Archaeplastida
LOC_Os03g06705.1 No alias 3-ketoacyl-CoA synthase (KCS) 0.02 Archaeplastida
LOC_Os03g08360.1 No alias 3-ketoacyl-CoA synthase (KCS) 0.02 Archaeplastida
LOC_Os03g12030.1 No alias 3-ketoacyl-CoA synthase (KCS) 0.02 Archaeplastida
LOC_Os03g14170.1 No alias 3-ketoacyl-CoA synthase (KCS) 0.02 Archaeplastida
LOC_Os09g19650.1 No alias 3-ketoacyl-CoA synthase (KCS) 0.03 Archaeplastida
MA_10605g0020 No alias 3-ketoacyl-CoA synthase (KCS) 0.02 Archaeplastida
MA_339700g0010 No alias 3-ketoacyl-CoA synthase (KCS) 0.03 Archaeplastida
MA_43136g0010 No alias 3-ketoacyl-CoA synthase (KCS) 0.04 Archaeplastida
MA_45157g0010 No alias 3-ketoacyl-CoA synthase (KCS) 0.03 Archaeplastida
MA_56709g0010 No alias 3-ketoacyl-CoA synthase (KCS) 0.03 Archaeplastida
Mp1g06080.1 No alias 3-ketoacyl-CoA synthase (KCS) 0.02 Archaeplastida
Smo79947 No alias Lipid metabolism.fatty acid synthesis.fatty acid... 0.03 Archaeplastida
Solyc02g085870.3.1 No alias 3-ketoacyl-CoA synthase (KCS) 0.03 Archaeplastida
Solyc05g009270.4.1 No alias 3-ketoacyl-CoA synthase (KCS) 0.02 Archaeplastida
Solyc06g053870.4.1 No alias 3-ketoacyl-CoA synthase (KCS) 0.02 Archaeplastida
Solyc08g067260.4.1 No alias 3-ketoacyl-CoA synthase (KCS) 0.06 Archaeplastida
Solyc09g083050.3.1 No alias 3-ketoacyl-CoA synthase (KCS) 0.05 Archaeplastida
Solyc10g009240.3.1 No alias 3-ketoacyl-CoA synthase (KCS) 0.04 Archaeplastida
Solyc11g072990.1.1 No alias 3-ketoacyl-CoA synthase (KCS) 0.03 Archaeplastida
Zm00001e000476_P001 No alias 3-ketoacyl-CoA synthase (KCS) 0.04 Archaeplastida
Zm00001e000593_P001 No alias 3-ketoacyl-CoA synthase (KCS) 0.04 Archaeplastida
Zm00001e000868_P002 No alias 3-ketoacyl-CoA synthase (KCS) 0.03 Archaeplastida
Zm00001e001021_P002 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e001847_P001 No alias 3-ketoacyl-CoA synthase (KCS) 0.03 Archaeplastida
Zm00001e004603_P002 No alias 3-ketoacyl-CoA synthase (KCS) 0.02 Archaeplastida
Zm00001e004773_P001 No alias 3-ketoacyl-CoA synthase (KCS) 0.03 Archaeplastida
Zm00001e012803_P001 No alias 3-ketoacyl-CoA synthase (KCS) 0.02 Archaeplastida
Zm00001e021255_P001 No alias 3-ketoacyl-CoA synthase (KCS) 0.02 Archaeplastida
Zm00001e023474_P001 No alias 3-ketoacyl-CoA synthase (KCS) 0.03 Archaeplastida
Zm00001e034732_P001 No alias 3-ketoacyl-CoA synthase (KCS) 0.02 Archaeplastida
Zm00001e038586_P001 No alias 3-ketoacyl-CoA synthase (KCS) 0.02 Archaeplastida
AT1G68530 G2, POP1, KCS6,... 3-ketoacyl-CoA synthase 6 0.02 LandPlants
GSVIVT01026270001 No alias Lipid metabolism.fatty acid synthesis.fatty acid... 0.02 LandPlants
GSVIVT01034244001 No alias Lipid metabolism.fatty acid synthesis.fatty acid... 0.02 LandPlants
LOC_Os09g19650.1 No alias 3-ketoacyl-CoA synthase (KCS) 0.02 LandPlants
MA_91011g0010 No alias 3-ketoacyl-CoA synthase (KCS) 0.02 LandPlants
Pp3c1_37250V3.1 No alias 3-ketoacyl-CoA synthase 4 0.01 LandPlants
Solyc02g085870.3.1 No alias 3-ketoacyl-CoA synthase (KCS) 0.02 LandPlants
Solyc09g083050.3.1 No alias 3-ketoacyl-CoA synthase (KCS) 0.03 LandPlants
Solyc10g009240.3.1 No alias 3-ketoacyl-CoA synthase (KCS) 0.03 LandPlants
Zm00001e000593_P001 No alias 3-ketoacyl-CoA synthase (KCS) 0.03 LandPlants
Zm00001e033922_P001 No alias 3-ketoacyl-CoA synthase (KCS) 0.02 LandPlants
Zm00001e038586_P001 No alias 3-ketoacyl-CoA synthase (KCS) 0.02 LandPlants
AT1G68530 G2, POP1, KCS6,... 3-ketoacyl-CoA synthase 6 0.02 SeedPlants
MA_91011g0010 No alias 3-ketoacyl-CoA synthase (KCS) 0.02 SeedPlants
Solyc09g083050.3.1 No alias 3-ketoacyl-CoA synthase (KCS) 0.03 SeedPlants
Solyc10g009240.3.1 No alias 3-ketoacyl-CoA synthase (KCS) 0.03 SeedPlants
Zm00001e000593_P001 No alias 3-ketoacyl-CoA synthase (KCS) 0.01 SeedPlants

Type GO Term Name Evidence Source
BP GO:0006633 fatty acid biosynthetic process IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
MF GO:0016746 transferase activity, transferring acyl groups IEA Interproscan
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR013601 FAE1_typ3_polyketide_synth 117 406
IPR012328 Chalcone/stilbene_synt_C 425 470
No external refs found!