Smo82367 (PACid_15410537)


Aliases : PACid_15410537

Description : 1.3.13 PS.calvin cycle.rubisco interacting P-loop containing nucleoside triphosphate hydrolases superfamily protein FUNCTIONS IN: ATPase activity, ATP binding LOCATED IN: chloroplast thylakoid membrane, chloroplast EXPRESSED IN: 21 plant structures EXPRESSED DURING: 13 growth stages CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core (InterPro:IPR003959) BEST Arabidopsis thaliana protein match is: rubisco activase (TAIR:AT2G39730.1) Has 469 Blast hits to 469 proteins in 170 species: Archae - 27 Bacteria - 71 Metazoa - 17 Fungi - 60 Plants - 256 Viruses - 0 Other Eukaryotes - 38 (source: NCBI BLink). & (loc_os04g56320.1 : 530.0


Gene families : OG_01_0006727 (Gene family) Phylogenetic Tree(s): OG0006727_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Smo82367
Cluster HCCA cluster: Cluster_167

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01016062001 No alias 1.3.13 PS.calvin cycle.rubisco interacting P-loop... 0.05 Gene family
LOC_Os04g56320 Os04g0658300 1.3.13 PS.calvin cycle.rubisco interacting P-loop... 0.08 Gene family
MA_10428784g0010 No alias 1.3.13 PS.calvin cycle.rubisco interacting P-loop... 0.02 Gene family
Solyc03g117850.3.1 Solyc03g117850.3 1.3.13 PS.calvin cycle.rubisco interacting P-loop... 0.08 Gene family

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR003959 ATPase_AAA_core 152 294
No external refs found!