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  5. Msp_g30612

Msp_g30612 (ATBHLH029, BHLH029,...)


Aliases : ATBHLH029, BHLH029, FIT1, ATBHLH29, FRU, ATFIT1

Description : bHLH-type transcription factor & original description: none


Gene families : OG0000267 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000267_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g30612

Target Alias Description ECC score Gene Family Method Actions
AT4G21330 DYT1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 OrthoFinder output from all 47 species
Als_g11513 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Als_g38123 ATBHLH029,... bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g11860 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g25422 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0003.g007559 SCRM2, ICE2 bHLH-type transcription factor & original description: CDS=1-894 0.03 OrthoFinder output from all 47 species
Azfi_s0006.g009834 No alias bHLH-type transcription factor & original description:... 0.04 OrthoFinder output from all 47 species
Cba_g15970 No alias bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g50660 AMS bHLH-type transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Ceric.01G042200.1 Ceric.01G042200 bHLH-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.01G112100.1 Ceric.01G112100 bHLH-type transcription factor & original description:... 0.05 OrthoFinder output from all 47 species
Ceric.20G044800.1 Ceric.20G044800 bHLH-type transcription factor & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.20G045100.1 Ceric.20G045100 bHLH-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.29G058800.1 Ceric.29G058800 bHLH-type transcription factor & original description:... 0.04 OrthoFinder output from all 47 species
Dac_g14460 No alias bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g21599 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Len_g54056 ATBHLH029,... bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Len_g58793 ATBHLH029,... bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
MA_10433418g0010 SCRM2, ICE2 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
MA_2643g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_439607g0010 SCRM2, ICE2 transcription factor (bHLH) 0.04 OrthoFinder output from all 47 species
Mp2g07150.1 No alias transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Nbi_g06961 ATBHLH029,... bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g07432 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g18822 SCRM2, ICE2 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g06042 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc02g079810.3.1 DYT1, Solyc02g079810 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Solyc06g051550.4.1 ATBHLH029,... transcription factor (bHLH). iron uptake transcription factor FIT 0.02 OrthoFinder output from all 47 species
Spa_g02622 No alias bHLH-type transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g52634 SCRM2, ICE2 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g43403 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e040732_P001 ATBHLH029,... transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005576 extracellular region IEP HCCA
CC GO:0005618 cell wall IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0009733 response to auxin IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP HCCA
CC GO:0030312 external encapsulating structure IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
MF GO:0043743 LPPG:FO 2-phospho-L-lactate transferase activity IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
CC GO:0048046 apoplast IEP HCCA
InterPro domains Description Start Stop
IPR011598 bHLH_dom 199 240
No external refs found!