Smo82124 (PACid_15408823)

Aliases : PACid_15408823

Description : lipid metabolism.lipid degradation.lysophospholipases.glycerophosphodiester phosphodiesterase PLC-like phosphodiesterases superfamily protein FUNCTIONS IN: phosphoric diester hydrolase activity, glycerophosphodiester phosphodiesterase activity INVOLVED IN: glycerol metabolic process, lipid metabolic process EXPRESSED IN: 23 plant structures EXPRESSED DURING: 14 growth stages CONTAINS InterPro DOMAIN/s: PLC-like phosphodiesterase, TIM beta/alpha-barrel domain (InterPro:IPR017946), Glycerophosphoryl diester phosphodiesterase (InterPro:IPR004129) BEST Arabidopsis thaliana protein match is: senescence-related gene 3 (TAIR:AT3G02040.1) Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798 Bacteria - 22429 Metazoa - 974 Fungi - 991 Plants - 531 Viruses - 0 Other Eukaryotes - 9610 (source: NCBI BLink). & (loc_os02g31030.1 : 276.0

Gene families : OG_01_0002020 (Gene family) Phylogenetic Tree(s): OG0002020_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR network (cutoff 100): Smo82124
Cluster HCCA cluster: Cluster_126

Target Alias Description ECC score Gene Family Method Actions
LOC_Os02g31030 Os02g0514500 lipid metabolism.lipid... 0.02 Gene family
MA_10436986g0020 No alias No description available 0.02 Gene family
Zm00001d016588 GRMZM2G018820 lipid metabolism.lipid... 0.02 Gene family
Zm00001d031653 GRMZM2G064962 lipid metabolism.lipid... 0.02 Gene family

Type GO Term Name Evidence Source
BP GO:0006629 lipid metabolic process IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR030395 GP_PDE_dom 8 291
No external refs found!