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  5. Msp_g30256

Msp_g30256


Description : not classified & original description: none


Gene families : OG0000530 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000530_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g30256
Cluster HCCA: Cluster_10

Target Alias Description ECC score Gene Family Method Actions
Als_g15142 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g17632 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g29163 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g30759 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g42510 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g62745 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g01700 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g30952 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene42337.t1 Aspi01Gene42337 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene42344.t1 Aspi01Gene42344 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene42346.t1 Aspi01Gene42346 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g22455 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g31843 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g78211 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.01G122100.1 Ceric.01G122100 not classified & original description: pacid=50592616... 0.03 OrthoFinder output from all 47 species
Ceric.03G010300.1 Ceric.03G010300 not classified & original description: pacid=50572279... 0.06 OrthoFinder output from all 47 species
Ceric.06G065900.1 Ceric.06G065900 not classified & original description: pacid=50619764... 0.04 OrthoFinder output from all 47 species
Ceric.19G004900.1 Ceric.19G004900 not classified & original description: pacid=50575637... 0.03 OrthoFinder output from all 47 species
Dac_g39043 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g01300 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g07833 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g01190 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g21249 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g57073 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g10241 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g14398 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g20761 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g31058 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g44028 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g12864 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc01g108440.2.1 Solyc01g108440 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Solyc04g079350.1.1 Solyc04g079350 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Spa_g12150 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g16397 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g30584 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g04535 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP HCCA
BP GO:0000097 sulfur amino acid biosynthetic process IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004664 prephenate dehydratase activity IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006534 cysteine metabolic process IEP HCCA
BP GO:0006535 cysteine biosynthetic process from serine IEP HCCA
BP GO:0006558 L-phenylalanine metabolic process IEP HCCA
BP GO:0006563 L-serine metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008198 ferrous iron binding IEP HCCA
MF GO:0008374 O-acyltransferase activity IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
MF GO:0009001 serine O-acetyltransferase activity IEP HCCA
BP GO:0009069 serine family amino acid metabolic process IEP HCCA
BP GO:0009070 serine family amino acid biosynthetic process IEP HCCA
BP GO:0009072 aromatic amino acid metabolic process IEP HCCA
BP GO:0009073 aromatic amino acid family biosynthetic process IEP HCCA
BP GO:0009094 L-phenylalanine biosynthetic process IEP HCCA
BP GO:0009095 aromatic amino acid family biosynthetic process, prephenate pathway IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016407 acetyltransferase activity IEP HCCA
MF GO:0016412 serine O-acyltransferase activity IEP HCCA
MF GO:0016413 O-acetyltransferase activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016836 hydro-lyase activity IEP HCCA
BP GO:0019344 cysteine biosynthetic process IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044272 sulfur compound biosynthetic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
BP GO:1902221 erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process IEP HCCA
BP GO:1902223 erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR012442 DUF1645_plant 4 300
No external refs found!