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  5. Msp_g30058

Msp_g30058


Description : solute transporter *(NAT) & original description: none


Gene families : OG0000475 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000475_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g30058

Target Alias Description ECC score Gene Family Method Actions
AT2G05760 No alias Xanthine/uracil permease family protein 0.04 OrthoFinder output from all 47 species
AT2G34190 No alias Xanthine/uracil permease family protein 0.03 OrthoFinder output from all 47 species
Adi_g025465 No alias solute transporter *(NAT) & original description: none 0.09 OrthoFinder output from all 47 species
Ala_g25211 No alias solute transporter *(NAT) & original description: none 0.07 OrthoFinder output from all 47 species
Als_g00933 No alias solute transporter *(NAT) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g09971 No alias solute transporter *(NAT) & original description: none 0.05 OrthoFinder output from all 47 species
Als_g40712 No alias solute transporter *(NAT) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g08308 No alias solute transporter *(NAT) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g12772 No alias solute transporter *(NAT) & original description: none 0.11 OrthoFinder output from all 47 species
Dac_g05724 No alias solute transporter *(NAT) & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g14848 No alias solute transporter *(NAT) & original description: none 0.11 OrthoFinder output from all 47 species
Dac_g22944 No alias solute transporter *(NAT) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g02884 No alias solute transporter *(NAT) & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g12691 No alias solute transporter *(NAT) & original description: none 0.04 OrthoFinder output from all 47 species
Gb_40664 NAT7, ATNAT7 solute transporter (NAT) 0.03 OrthoFinder output from all 47 species
LOC_Os01g55500.1 LOC_Os01g55500 solute transporter (NAT) 0.03 OrthoFinder output from all 47 species
LOC_Os02g50820.1 LOC_Os02g50820 solute transporter (NAT) 0.02 OrthoFinder output from all 47 species
LOC_Os08g32500.1 LOC_Os08g32500 solute transporter (NAT) 0.07 OrthoFinder output from all 47 species
LOC_Os09g15170.1 LOC_Os09g15170 solute transporter (NAT) 0.03 OrthoFinder output from all 47 species
Len_g00677 No alias solute transporter *(NAT) & original description: none 0.06 OrthoFinder output from all 47 species
Len_g10406 No alias solute transporter *(NAT) & original description: none 0.03 OrthoFinder output from all 47 species
Len_g24186 No alias solute transporter *(NAT) & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g18801 No alias solute transporter *(NAT) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g28268 No alias solute transporter *(NAT) & original description: none 0.02 OrthoFinder output from all 47 species
Mp8g05640.1 No alias solute transporter (NAT) 0.05 OrthoFinder output from all 47 species
Nbi_g07259 No alias solute transporter *(NAT) & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g02988 No alias solute transporter *(NAT) & original description: none 0.07 OrthoFinder output from all 47 species
Ppi_g03023 No alias solute transporter *(NAT) & original description: none 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0006.g003401 No alias solute transporter *(NAT) & original description: CDS=1-1707 0.03 OrthoFinder output from all 47 species
Sam_g06480 No alias solute transporter *(NAT) & original description: none 0.15 OrthoFinder output from all 47 species
Sam_g09619 No alias solute transporter *(NAT) & original description: none 0.03 OrthoFinder output from all 47 species
Smo185282 No alias Solute transport.carrier-mediated transport.APC... 0.03 OrthoFinder output from all 47 species
Smo73581 No alias Solute transport.carrier-mediated transport.APC... 0.03 OrthoFinder output from all 47 species
Solyc02g072500.3.1 Solyc02g072500 solute transporter (NAT) 0.07 OrthoFinder output from all 47 species
Solyc06g071330.4.1 Solyc06g071330 solute transporter (NAT) 0.03 OrthoFinder output from all 47 species
Solyc07g049320.4.1 Solyc07g049320 solute transporter (NAT) 0.04 OrthoFinder output from all 47 species
Spa_g04707 No alias solute transporter *(NAT) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g05688 No alias solute transporter *(NAT) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g07450 No alias solute transporter *(NAT) & original description: none 0.11 OrthoFinder output from all 47 species
Tin_g00883 No alias solute transporter *(NAT) & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g04574 No alias solute transporter *(NAT) & original description: none 0.18 OrthoFinder output from all 47 species
Zm00001e006213_P001 Zm00001e006213 solute transporter (NAT) 0.03 OrthoFinder output from all 47 species
Zm00001e009683_P001 Zm00001e009683 solute transporter (NAT) 0.02 OrthoFinder output from all 47 species
Zm00001e021544_P001 Zm00001e021544 solute transporter (NAT) 0.02 OrthoFinder output from all 47 species
Zm00001e029011_P005 Zm00001e029011 solute transporter (NAT) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
MF GO:0022857 transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
CC GO:0000775 chromosome, centromeric region IEP HCCA
CC GO:0000808 origin recognition complex IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0003887 DNA-directed DNA polymerase activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
CC GO:0005664 nuclear origin of replication recognition complex IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006269 DNA replication, synthesis of RNA primer IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
BP GO:0007059 chromosome segregation IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0022402 cell cycle process IEP HCCA
BP GO:0022414 reproductive process IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
BP GO:0032392 DNA geometric change IEP HCCA
BP GO:0032508 DNA duplex unwinding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
MF GO:0034061 DNA polymerase activity IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0045132 meiotic chromosome segregation IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
CC GO:0098687 chromosomal region IEP HCCA
BP GO:0098813 nuclear chromosome segregation IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1903046 meiotic cell cycle process IEP HCCA
InterPro domains Description Start Stop
IPR006043 NCS2 35 439
No external refs found!