Msp_g29900


Description : not classified & original description: none


Gene families : OG0004827 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004827_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g29900
Cluster HCCA: Cluster_131

Target Alias Description ECC score Gene Family Method Actions
Ala_g11942 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g39212 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g17861 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g10723 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.08G049600.1 Ceric.08G049600 not classified & original description: pacid=50638367... 0.09 OrthoFinder output from all 47 species
Ceric.08G049900.1 Ceric.08G049900 not classified & original description: pacid=50638950... 0.04 OrthoFinder output from all 47 species
Ceric.08G050000.1 Ceric.08G050000 not classified & original description: pacid=50637967... 0.04 OrthoFinder output from all 47 species
Ceric.08G050100.1 Ceric.08G050100 not classified & original description: pacid=50638776... 0.05 OrthoFinder output from all 47 species
Ceric.26G033500.1 Ceric.26G033500 not classified & original description: pacid=50600128... 0.04 OrthoFinder output from all 47 species
Dac_g08007 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g30844 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g15545 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g58930 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g28001 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g14911 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g29083 ATCSLA14, CSLA14 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g20069 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Sacu_v1.1_s0205.g025730 CSLA02, ATCSLA2,... not classified & original description: CDS=116-2359 0.03 OrthoFinder output from all 47 species
Smo432432 No alias Probable xyloglucan glycosyltransferase 5 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA

No InterPro domains available for this sequence

No external refs found!