Msp_g29424 (HSP17.6II)


Aliases : HSP17.6II

Description : class-C-II small heat-shock-responsive protein & original description: none


Gene families : OG0000041 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g29424

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00023p00248940 ATHSP17.4,... 17.9 kDa class I heat shock protein OS=Oryza sativa... 0.01 OrthoFinder output from all 47 species
Adi_g010153 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g048731 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g10575 HSP18.2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g51400 HSP18.2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g20669 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene14677.t1 HSP17.6A,... class-C-II small heat-shock-responsive protein &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene18752.t1 HSP18.2, Aspi01Gene18752 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.36G011600.1 Ceric.36G011600 not classified & original description: pacid=50568026... 0.03 OrthoFinder output from all 47 species
Dcu_g17544 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ehy_g25552 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g28344 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g13918 HSP17.6A,... class-C-II small heat-shock-responsive protein &... 0.01 OrthoFinder output from all 47 species
Lfl_g19966 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_104806g0010 ATHSP17.4, HSP17.4 17.3 kDa class I heat shock protein OS=Glycine max... 0.02 OrthoFinder output from all 47 species
Mp2g22630.1 ATHSP17.4, HSP17.4 17.3 kDa class I heat shock protein OS=Glycine max... 0.01 OrthoFinder output from all 47 species
Mp7g02030.1 No alias 18.2 kDa class I heat shock protein OS=Medicago sativa... 0.02 OrthoFinder output from all 47 species
Ore_g03566 HSP17.6A,... class-C-II small heat-shock-responsive protein &... 0.02 OrthoFinder output from all 47 species
Pir_g45018 HSP18.2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g31347 ATHSP17.4, HSP17.4 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0010.g004809 HSP18.2 not classified & original description: CDS=1105-1593 0.03 OrthoFinder output from all 47 species
Sam_g18444 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0010024 phytochromobilin biosynthetic process IEP HCCA
CC GO:0015934 large ribosomal subunit IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
MF GO:0016636 oxidoreductase activity, acting on the CH-CH group of donors, iron-sulfur protein as acceptor IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0033014 tetrapyrrole biosynthetic process IEP HCCA
BP GO:0043648 dicarboxylic acid metabolic process IEP HCCA
BP GO:0043650 dicarboxylic acid biosynthetic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
CC GO:0044391 ribosomal subunit IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
MF GO:0050897 cobalt ion binding IEP HCCA
BP GO:0051202 phytochromobilin metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR002068 A-crystallin/Hsp20_dom 348 451
No external refs found!