1. Home
  2. Species
  3. Microlepia speluncae
  4. Sequence
  5. Msp_g29224

Msp_g29224


Description : not classified & original description: none


Gene families : OG0000144 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000144_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g29224

Target Alias Description ECC score Gene Family Method Actions
AT1G12440 No alias A20/AN1-like zinc finger family protein 0.02 OrthoFinder output from all 47 species
Aev_g00817 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os02g10200.1 LOC_Os02g10200 Zinc finger A20 and AN1 domain-containing... 0.04 OrthoFinder output from all 47 species
LOC_Os03g57890.1 LOC_Os03g57890 Zinc finger A20 and AN1 domain-containing... 0.03 OrthoFinder output from all 47 species
LOC_Os07g07350.3 LOC_Os07g07350 Zinc finger A20 and AN1 domain-containing... 0.03 OrthoFinder output from all 47 species
Mp4g23510.1 No alias Zinc finger A20 and AN1 domain-containing... 0.02 OrthoFinder output from all 47 species
Pnu_g11889 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
BP GO:0006897 endocytosis IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
InterPro domains Description Start Stop
IPR000058 Znf_AN1 145 181
IPR002653 Znf_A20 51 73
No external refs found!