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  5. Msp_g29153

Msp_g29153


Description : not classified & original description: none


Gene families : OG0000711 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000711_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g29153
Cluster HCCA: Cluster_125

Target Alias Description ECC score Gene Family Method Actions
Azfi_s0050.g030981 No alias not classified & original description: CDS=474-1034 0.03 OrthoFinder output from all 47 species
Ceric.17G047700.1 Ceric.17G047700 not classified & original description: pacid=50618543... 0.03 OrthoFinder output from all 47 species
Mp5g13700.1 No alias no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Msp_g08077 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g11726 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g50925 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003779 actin binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003968 RNA-dependent RNA polymerase activity IEP HCCA
MF GO:0003993 acid phosphatase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0015267 channel activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
InterPro domains Description Start Stop
IPR011058 Cyanovirin-N 58 115
IPR011058 Cyanovirin-N 123 169
No external refs found!