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  5. Msp_g29122

Msp_g29122


Description : not classified & original description: none


Gene families : OG0000402 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000402_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g29122

Target Alias Description ECC score Gene Family Method Actions
Aev_g13062 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g16047 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g20182 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g32072 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene25981.t1 Aspi01Gene25981 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0253.g060397 No alias not classified & original description: CDS=132-3128 0.03 OrthoFinder output from all 47 species
Cba_g22982 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.04G075300.1 Ceric.04G075300 not classified & original description: pacid=50631416... 0.02 OrthoFinder output from all 47 species
Ceric.35G031200.1 Ceric.35G031200 not classified & original description: pacid=50581090... 0.03 OrthoFinder output from all 47 species
Dcu_g09002 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01017972001 No alias RNA biosynthesis.transcriptional activation.PHD finger... 0.03 OrthoFinder output from all 47 species
Gb_06644 No alias component IDM1 of ROS1-recruitment complex. PHD finger... 0.06 OrthoFinder output from all 47 species
Gb_10246 No alias PHD finger transcription factor 0.03 OrthoFinder output from all 47 species
LOC_Os04g59510.1 LOC_Os04g59510 PHD finger transcription factor 0.05 OrthoFinder output from all 47 species
Len_g50209 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g06765 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_139275g0010 No alias PHD finger transcription factor 0.03 OrthoFinder output from all 47 species
MA_14500g0010 No alias component IDM1 of ROS1-recruitment complex. PHD finger... 0.04 OrthoFinder output from all 47 species
MA_22311g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Mp6g21030.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0020.g008129 No alias not classified & original description: CDS=562-3384 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0245.g026694 No alias not classified & original description: CDS=519-4760 0.03 OrthoFinder output from all 47 species
Sam_g15944 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc03g071550.3.1 Solyc03g071550 PHD finger transcription factor 0.04 OrthoFinder output from all 47 species
Solyc06g082040.2.1 Solyc06g082040 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Solyc09g065340.3.1 Solyc09g065340 PHD finger transcription factor 0.02 OrthoFinder output from all 47 species
Spa_g50990 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g21039 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e005667_P001 Zm00001e005667 PHD finger transcription factor 0.04 OrthoFinder output from all 47 species
Zm00001e012046_P003 Zm00001e012046 PHD finger transcription factor 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
InterPro domains Description Start Stop
IPR008395 Agenet-like_dom 22 116
No external refs found!