Msp_g29094


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g29094

Target Alias Description ECC score Gene Family Method Actions
Adi_g005281 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g47897 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g18934 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g18957 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g33541 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g61873 EMB2758 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g16780 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g29297 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g36072 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g63625 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g68032 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Azfi_s0098.g043939 EMB2758 not classified & original description: CDS=1-1746 0.05 OrthoFinder output from all 47 species
Azfi_s0254.g060431 No alias not classified & original description: CDS=1-2856 0.04 OrthoFinder output from all 47 species
Cba_g11093 EMB2758 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Cba_g20479 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Cba_g20635 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g33383 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.01G084700.1 VAC1, ECB2,... not classified & original description: pacid=50592179... 0.06 OrthoFinder output from all 47 species
Ceric.04G103900.1 Ceric.04G103900 ssDNA-binding protein *(OSB) & original description:... 0.06 OrthoFinder output from all 47 species
Dac_g04996 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g15087 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g18405 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g18431 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g25215 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g31776 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g32635 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dac_g33014 EMB2261 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g36005 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g38568 REME1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g42987 DOT4 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g16544 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g35959 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g35988 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dcu_g38858 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g46395 EMB2758 not classified & original description: none 0.08 OrthoFinder output from all 47 species
Ehy_g16282 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01003957001 No alias Pentatricopeptide repeat-containing protein At5g65570... 0.02 OrthoFinder output from all 47 species
GSVIVT01008173001 No alias Pentatricopeptide repeat-containing protein At1g18485... 0.03 OrthoFinder output from all 47 species
GSVIVT01009407001 EMB2261 Pentatricopeptide repeat-containing protein At2g27610... 0.03 OrthoFinder output from all 47 species
GSVIVT01012201001 OTP82 Pentatricopeptide repeat-containing protein At1g08070,... 0.02 OrthoFinder output from all 47 species
GSVIVT01015466001 LPA66 Pentatricopeptide repeat-containing protein At5g48910... 0.03 OrthoFinder output from all 47 species
GSVIVT01017209001 VAC1, ECB2, ATECB2 RNA processing.organelle machineries.RNA... 0.02 OrthoFinder output from all 47 species
GSVIVT01017365001 No alias Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
GSVIVT01021268001 No alias Pentatricopeptide repeat-containing protein At4g18840... 0.02 OrthoFinder output from all 47 species
GSVIVT01023971001 No alias Pentatricopeptide repeat-containing protein At4g35130,... 0.03 OrthoFinder output from all 47 species
GSVIVT01036142001 No alias Pentatricopeptide repeat-containing protein At5g66520... 0.03 OrthoFinder output from all 47 species
GSVIVT01036207001 OTP82 Pentatricopeptide repeat-containing protein At5g66520... 0.03 OrthoFinder output from all 47 species
GSVIVT01036511001 No alias RNA processing.organelle machineries.RNA... 0.02 OrthoFinder output from all 47 species
Gb_05982 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.06 OrthoFinder output from all 47 species
Gb_07914 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.06 OrthoFinder output from all 47 species
LOC_Os01g45840.1 LOC_Os01g45840 Pentatricopeptide repeat-containing protein At2g36730... 0.02 OrthoFinder output from all 47 species
LOC_Os04g02850.1 OTP84, LOC_Os04g02850 RNA editing factor (OTP84) 0.03 OrthoFinder output from all 47 species
Len_g18890 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_79624g0010 No alias Putative pentatricopeptide repeat-containing protein... 0.05 OrthoFinder output from all 47 species
Msp_g11341 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g48395 No alias ssDNA-binding protein *(OSB) & original description: none 0.07 OrthoFinder output from all 47 species
Ore_g06239 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g20288 REME1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g32978 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0009.g004580 No alias not classified & original description: CDS=1-2331 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0014.g006283 OTP82 not classified & original description: CDS=1-1473 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0063.g015714 CRR22 not classified & original description: CDS=1-1887 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0117.g021137 No alias ssDNA-binding protein *(OSB) & original description: CDS=1-933 0.06 OrthoFinder output from all 47 species
Sam_g22472 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Smo133320 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.02 OrthoFinder output from all 47 species
Smo74749 No alias Pentatricopeptide repeat-containing protein At3g24000,... 0.03 OrthoFinder output from all 47 species
Solyc03g119950.1.1 VAC1, ECB2,... RNA editing factor (ECB2/VAC1) 0.03 OrthoFinder output from all 47 species
Solyc09g065840.3.1 OSB1, Solyc09g065840 ssDNA-binding protein (OSB) 0.02 OrthoFinder output from all 47 species
Spa_g02644 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g07089 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g08057 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g14281 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g14566 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g17519 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g21307 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g22006 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g23796 REME1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g25388 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g26699 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g29490 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g54465 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g17792 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g38826 REME1 not classified & original description: none 0.08 OrthoFinder output from all 47 species
Tin_g44089 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g44700 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e000301_P001 Zm00001e000301 Pentatricopeptide repeat-containing protein At4g35130,... 0.03 OrthoFinder output from all 47 species
Zm00001e015727_P001 Zm00001e015727 Pentatricopeptide repeat-containing protein At5g66520... 0.03 OrthoFinder output from all 47 species
Zm00001e016923_P001 CRR2, Zm00001e016923 Pentatricopeptide repeat-containing protein At3g46790,... 0.03 OrthoFinder output from all 47 species
Zm00001e026664_P002 Zm00001e026664 RNA editing factor (BLX) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 11 55
No external refs found!