AMTR_s00018p00217640 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00018.140

Description : RNA processing.RNA 5-end cap adding.mRNA capping enzyme


Gene families : OG_01_0002161 (Archaeplastida) Phylogenetic Tree(s): OG_01_0002161_tree ,
OG_02_0002526 (LandPlants) Phylogenetic Tree(s): OG_02_0002526_tree ,
OG_03_0002923 (SeedPlants) Phylogenetic Tree(s): OG_03_0002923_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00018p00217640
Cluster HCCA: Cluster_189

Target Alias Description ECC score Gene Family Method Actions
Solyc09g065010.4.1 No alias mRNA capping enzyme 0.02 Archaeplastida
Solyc09g065010.4.1 No alias mRNA capping enzyme 0.02 LandPlants
Solyc09g011930.3.1 No alias mRNA capping enzyme 0.02 SeedPlants
Solyc09g065010.4.1 No alias mRNA capping enzyme 0.02 SeedPlants

Type GO Term Name Evidence Source
MF GO:0004484 mRNA guanylyltransferase activity IEA Interproscan
BP GO:0006370 7-methylguanosine mRNA capping IEA Interproscan
BP GO:0006397 mRNA processing IEA Interproscan
BP GO:0006470 protein dephosphorylation IEA Interproscan
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001339 mRNA_cap_enzyme 344 537
IPR013846 mRNA_cap_enzyme_C 541 637
No external refs found!