Msp_g28794


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g28794

Target Alias Description ECC score Gene Family Method Actions
Adi_g004392 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g008014 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g026401 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g069188 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g097113 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g16829 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g18876 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g21860 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g28360 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g30600 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g31152 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g31201 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g36503 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g37466 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g38943 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g07519 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g12675 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g18767 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g19304 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g19869 LPA66 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g23947 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g26399 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g26635 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g30828 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g32865 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g38696 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g54957 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g27603 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g27610 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g28645 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g37980 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g40871 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g03233 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g16770 CRR22 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g21628 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g26368 No alias ssDNA-binding protein *(OSB) & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g27203 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g68065 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g70449 DOT4 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene13090.t2 Aspi01Gene13090 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene46609.t1 CRR22, Aspi01Gene46609 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07719 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g19051 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g19898 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g19908 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g20724 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g20779 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20824 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g30018 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g34536 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g34641 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g67910 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.03G039400.1 Ceric.03G039400 not classified & original description: pacid=50571919... 0.06 OrthoFinder output from all 47 species
Ceric.04G068300.1 CRR22, Ceric.04G068300 not classified & original description: pacid=50630217... 0.05 OrthoFinder output from all 47 species
Ceric.05G019900.1 CRR22, Ceric.05G019900 not classified & original description: pacid=50578663... 0.05 OrthoFinder output from all 47 species
Ceric.10G043800.1 Ceric.10G043800 not classified & original description: pacid=50613534... 0.04 OrthoFinder output from all 47 species
Ceric.11G009800.1 Ceric.11G009800 not classified & original description: pacid=50594985... 0.04 OrthoFinder output from all 47 species
Ceric.1Z110500.1 Ceric.1Z110500 not classified & original description: pacid=50639205... 0.05 OrthoFinder output from all 47 species
Ceric.24G028500.1 Ceric.24G028500 not classified & original description: pacid=50629587... 0.04 OrthoFinder output from all 47 species
Ceric.29G060200.1 Ceric.29G060200 not classified & original description: pacid=50624987... 0.07 OrthoFinder output from all 47 species
Ceric.34G063100.1 Ceric.34G063100 not classified & original description: pacid=50623551... 0.07 OrthoFinder output from all 47 species
Ceric.35G061000.1 CRR22, Ceric.35G061000 not classified & original description: pacid=50581720... 0.05 OrthoFinder output from all 47 species
Dac_g13534 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g22002 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g07093 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g07608 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g07713 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g38682 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dde_g03352 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dde_g04453 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g05888 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g09819 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g10497 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g22727 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g23651 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g24674 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g25105 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g25446 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g26477 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g06075 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g18910 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01031849001 OTP84 Pentatricopeptide repeat-containing protein At3g57430,... 0.04 OrthoFinder output from all 47 species
GSVIVT01033863001 No alias RNA processing.organelle machineries.RNA... 0.04 OrthoFinder output from all 47 species
LOC_Os01g41650.1 LOC_Os01g41650 Pentatricopeptide repeat-containing protein At4g13650... 0.02 OrthoFinder output from all 47 species
LOC_Os04g14130.1 LOC_Os04g14130 Pentatricopeptide repeat-containing protein At5g16860... 0.04 OrthoFinder output from all 47 species
LOC_Os06g47920.1 LOC_Os06g47920 Pentatricopeptide repeat-containing protein At5g44230... 0.02 OrthoFinder output from all 47 species
Len_g17747 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g07418 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g32791 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g28092 No alias ssDNA-binding protein *(OSB) & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g10308 EMB2261 not classified & original description: none 0.09 OrthoFinder output from all 47 species
Nbi_g10800 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g15839 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g16471 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g25933 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g29119 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g39306 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g04779 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g12907 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g57371 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g06450 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g06858 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g06977 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g07362 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g07419 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g08802 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g44678 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53728 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g53964 MEF19 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g55034 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g56808 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g59292 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g63671 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0047.g013488 No alias not classified & original description: CDS=1-3012 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0116.g021049 VAC1, ECB2, ATECB2 not classified & original description: CDS=1-2289 0.03 OrthoFinder output from all 47 species
Sam_g16146 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g16371 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Smo30095 No alias Pentatricopeptide repeat-containing protein At3g57430,... 0.03 OrthoFinder output from all 47 species
Solyc01g095690.2.1 Solyc01g095690 Pentatricopeptide repeat-containing protein At4g01030,... 0.03 OrthoFinder output from all 47 species
Spa_g12945 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g14555 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g15000 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g18928 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g19054 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g20291 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g21106 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g21662 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g24192 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g31188 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g33276 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g42473 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g54465 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g04184 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g05186 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g08446 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g12273 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g20704 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g23272 VAC1, ECB2, ATECB2 not classified & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 250 297
IPR002885 Pentatricopeptide_repeat 148 195
IPR002885 Pentatricopeptide_repeat 454 501
IPR002885 Pentatricopeptide_repeat 352 399
No external refs found!