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  5. Msp_g28697

Msp_g28697 (ATCSLD2, CSLD2)


Aliases : ATCSLD2, CSLD2

Description : not classified & original description: none


Gene families : OG0000089 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000089_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g28697

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00048p00116140 ATCSLD3, KJK,... Cell wall.hemicellulose.heteromannan.synthesis.mannan... 0.03 OrthoFinder output from all 47 species
AMTR_s00067p00196920 CESA4, NWS2,... Cell wall.cellulose.synthesis.cellulose synthase complex... 0.03 OrthoFinder output from all 47 species
AMTR_s00103p00124340 IXR1, CEV1,... Cell wall.cellulose.synthesis.cellulose synthase complex... 0.03 OrthoFinder output from all 47 species
AMTR_s00137p00043990 MUR10, ATCESA7,... Cell wall.cellulose.synthesis.cellulose synthase complex... 0.03 OrthoFinder output from all 47 species
AT3G03050 ATCSLD3, KJK, CSLD3 cellulose synthase-like D3 0.04 OrthoFinder output from all 47 species
AT4G15290 ATCSLB05, CSLB05, ATCSLB5 Cellulose synthase family protein 0.04 OrthoFinder output from all 47 species
AT4G18780 CESA8, LEW2,... cellulose synthase family protein 0.03 OrthoFinder output from all 47 species
AT4G32410 AtCESA1, RSW1, CESA1 cellulose synthase 1 0.03 OrthoFinder output from all 47 species
AT5G05170 IXR1, CEV1,... Cellulose synthase family protein 0.03 OrthoFinder output from all 47 species
AT5G17420 MUR10, ATCESA7,... Cellulose synthase family protein 0.03 OrthoFinder output from all 47 species
AT5G44030 CESA4, NWS2, IRX5 cellulose synthase A4 0.03 OrthoFinder output from all 47 species
Adi_g081315 ATCSLD5, CSLD5, SOS6 mannan synthase *(CSLD) & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g104894 IXR1, CEV1,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g117325 AtCESA1, RSW1, CESA1 catalytic component *(CesA) of cellulose synthase... 0.02 OrthoFinder output from all 47 species
Adi_g117946 ATCSLD3, KJK, CSLD3 mannan synthase *(CSLD) & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g13699 IXR1, CEV1,... catalytic component *(CesA) of cellulose synthase... 0.04 OrthoFinder output from all 47 species
Ala_g14910 ATH-A, CESA2, ATCESA2 catalytic component *(CesA) of cellulose synthase... 0.03 OrthoFinder output from all 47 species
Ala_g38531 IXR1, CEV1,... catalytic component *(CesA) of cellulose synthase... 0.03 OrthoFinder output from all 47 species
Als_g12758 ATH-A, CESA2, ATCESA2 catalytic component *(CesA) of cellulose synthase... 0.06 OrthoFinder output from all 47 species
Als_g30902 ATH-A, CESA2, ATCESA2 catalytic component *(CesA) of cellulose synthase... 0.04 OrthoFinder output from all 47 species
Aob_g06076 ATH-A, CESA2, ATCESA2 catalytic component *(CesA) of cellulose synthase... 0.03 OrthoFinder output from all 47 species
Aob_g27306 ATH-A, CESA2, ATCESA2 catalytic component *(CesA) of cellulose synthase... 0.03 OrthoFinder output from all 47 species
Aob_g30935 IXR1, CEV1,... catalytic component *(CesA) of cellulose synthase... 0.03 OrthoFinder output from all 47 species
Aob_g40582 ATCSLD3, KJK, CSLD3 mannan synthase *(CSLD) & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g21811 ATH-A, CESA2, ATCESA2 catalytic component *(CesA) of cellulose synthase... 0.03 OrthoFinder output from all 47 species
Aop_g23682 IXR1, CEV1,... catalytic component *(CesA) of cellulose synthase... 0.04 OrthoFinder output from all 47 species
Azfi_s0059.g034631 ATH-A, CESA2, ATCESA2 catalytic component *(CesA) of cellulose synthase... 0.04 OrthoFinder output from all 47 species
Cba_g31777 ATH-A, CESA2, ATCESA2 catalytic component *(CesA) of cellulose synthase... 0.03 OrthoFinder output from all 47 species
Ceric.03G080400.1 ATH-A, CESA2,... catalytic component *(CesA) of cellulose synthase... 0.03 OrthoFinder output from all 47 species
Ceric.05G036200.1 IXR1, CEV1,... catalytic component *(CesA) of cellulose synthase... 0.03 OrthoFinder output from all 47 species
Dcu_g09052 ATH-A, CESA2, ATCESA2 catalytic component *(CesA) of cellulose synthase... 0.03 OrthoFinder output from all 47 species
Dcu_g12277 IXR1, CEV1,... catalytic component *(CesA) of cellulose synthase... 0.07 OrthoFinder output from all 47 species
Dcu_g31447 AtCESA1, RSW1, CESA1 catalytic component *(CesA) of cellulose synthase... 0.04 OrthoFinder output from all 47 species
Ehy_g04030 IXR1, CEV1,... catalytic component *(CesA) of cellulose synthase... 0.02 OrthoFinder output from all 47 species
Ehy_g06173 IXR1, CEV1,... catalytic component *(CesA) of cellulose synthase... 0.03 OrthoFinder output from all 47 species
Ehy_g18189 ATCSLD2, CSLD2 mannan synthase *(CSLD) & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01006761001 ATCSLE1, CSLE1 Cellulose synthase-like protein E6 OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
GSVIVT01021248001 CESA8, LEW2,... Cell wall.cellulose.synthesis.cellulose synthase complex... 0.02 OrthoFinder output from all 47 species
GSVIVT01021798001 CSLD1, ATCSLD1 Cell wall.hemicellulose.heteromannan.synthesis.mannan... 0.02 OrthoFinder output from all 47 species
GSVIVT01023643001 MUR10, ATCESA7,... Cell wall.cellulose.synthesis.cellulose synthase complex... 0.02 OrthoFinder output from all 47 species
GSVIVT01024398001 ATCSLD3, KJK, CSLD3 Cell wall.hemicellulose.heteromannan.synthesis.mannan... 0.02 OrthoFinder output from all 47 species
GSVIVT01028402001 CESA4, NWS2, IRX5 Cell wall.cellulose.synthesis.cellulose synthase complex... 0.02 OrthoFinder output from all 47 species
GSVIVT01030467001 CSLB04, ATCSLB4, ATCSLB04 Cellulose synthase-like protein H1 OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
GSVIVT01034552001 ATH-A, CESA2, ATCESA2 Cell wall.cellulose.synthesis.cellulose synthase complex... 0.05 OrthoFinder output from all 47 species
Gb_02801 ATCSLD3, KJK, CSLD3 mannan synthase (CSLD) 0.03 OrthoFinder output from all 47 species
Gb_39671 ATCSLD3, KJK, CSLD3 mannan synthase (CSLD) 0.03 OrthoFinder output from all 47 species
LOC_Os04g35020.1 CSLB04, ATCSLB4,... D-glucan synthase (CSLH) 0.02 OrthoFinder output from all 47 species
LOC_Os05g08370.1 AtCESA1, RSW1,... catalytic component CesA of cellulose synthase complex 0.03 OrthoFinder output from all 47 species
LOC_Os06g22980.1 CSLD1, ATCSLD1,... mannan synthase (CSLD) 0.02 OrthoFinder output from all 47 species
LOC_Os07g10770.1 IXR1, CEV1,... catalytic component CesA of cellulose synthase complex 0.03 OrthoFinder output from all 47 species
LOC_Os08g06380.1 ATCSLD2, CSLD2,... mannan synthase (CSLD). D-glucan synthase (CSLF) 0.02 OrthoFinder output from all 47 species
LOC_Os08g25710.1 ATCSLD4, CSLD4,... mannan synthase (CSLD) 0.03 OrthoFinder output from all 47 species
LOC_Os10g42750.1 ATCSLD3, KJK,... mannan synthase (CSLD) 0.02 OrthoFinder output from all 47 species
Len_g21269 IXR1, CEV1,... catalytic component *(CesA) of cellulose synthase... 0.04 OrthoFinder output from all 47 species
Lfl_g18769 IXR1, CEV1,... catalytic component *(CesA) of cellulose synthase... 0.03 OrthoFinder output from all 47 species
MA_10429177g0010 CESA8, LEW2,... catalytic component CesA of cellulose synthase complex 0.02 OrthoFinder output from all 47 species
MA_140410g0010 MUR10, ATCESA7,... catalytic component CesA of cellulose synthase complex 0.02 OrthoFinder output from all 47 species
MA_8061832g0010 CESA4, NWS2, IRX5 Cellulose synthase A catalytic subunit 4 [UDP-forming]... 0.03 OrthoFinder output from all 47 species
Nbi_g04994 ATCSLD3, KJK, CSLD3 mannan synthase *(CSLD) & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g06553 CESA09, CESA9 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g10485 AtCESA1, RSW1, CESA1 catalytic component *(CesA) of cellulose synthase... 0.03 OrthoFinder output from all 47 species
Pnu_g13304 ATH-A, CESA2, ATCESA2 catalytic component *(CesA) of cellulose synthase... 0.03 OrthoFinder output from all 47 species
Pnu_g18983 IXR1, CEV1,... catalytic component *(CesA) of cellulose synthase... 0.03 OrthoFinder output from all 47 species
Pnu_g32258 CESA4, NWS2, IRX5 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g22257 ATH-A, CESA2, ATCESA2 catalytic component *(CesA) of cellulose synthase... 0.03 OrthoFinder output from all 47 species
Ppi_g60444 ATH-A, CESA2, ATCESA2 catalytic component *(CesA) of cellulose synthase... 0.03 OrthoFinder output from all 47 species
Sam_g24445 No alias catalytic component *(CesA) of cellulose synthase... 0.02 OrthoFinder output from all 47 species
Sam_g27647 No alias catalytic component *(CesA) of cellulose synthase... 0.02 OrthoFinder output from all 47 species
Sam_g38935 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo163575 IXR1, CEV1,... Cell wall.cellulose.synthesis.cellulose synthase complex... 0.04 OrthoFinder output from all 47 species
Smo73698 AtCESA1, RSW1, CESA1 Cell wall.cellulose.synthesis.cellulose synthase complex... 0.03 OrthoFinder output from all 47 species
Solyc01g087210.3.1 IXR1, CEV1,... catalytic component CesA of cellulose synthase complex 0.03 OrthoFinder output from all 47 species
Solyc02g072240.3.1 CESA8, LEW2,... catalytic component CesA of cellulose synthase complex 0.02 OrthoFinder output from all 47 species
Solyc07g005840.2.1 MUR10, ATCESA7,... catalytic component CesA of cellulose synthase complex 0.02 OrthoFinder output from all 47 species
Solyc09g072820.4.1 CESA4, NWS2,... catalytic component CesA of cellulose synthase complex 0.02 OrthoFinder output from all 47 species
Spa_g05758 AtCESA1, RSW1, CESA1 catalytic component *(CesA) of cellulose synthase... 0.05 OrthoFinder output from all 47 species
Spa_g21970 IXR1, CEV1,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g22180 IXR1, CEV1,... catalytic component *(CesA) of cellulose synthase... 0.03 OrthoFinder output from all 47 species
Spa_g26209 ATH-A, CESA2, ATCESA2 catalytic component *(CesA) of cellulose synthase... 0.05 OrthoFinder output from all 47 species
Spa_g26389 IXR1, CEV1,... catalytic component *(CesA) of cellulose synthase... 0.03 OrthoFinder output from all 47 species
Spa_g39807 ATH-A, CESA2, ATCESA2 catalytic component *(CesA) of cellulose synthase... 0.05 OrthoFinder output from all 47 species
Spa_g51152 ATCSLD3, KJK, CSLD3 mannan synthase *(CSLD) & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g13995 ATH-A, CESA2, ATCESA2 catalytic component *(CesA) of cellulose synthase... 0.03 OrthoFinder output from all 47 species
Zm00001e004630_P001 CESA4, NWS2,... catalytic component CesA of cellulose synthase complex 0.04 OrthoFinder output from all 47 species
Zm00001e009406_P001 IXR1, CEV1,... catalytic component CesA of cellulose synthase complex 0.03 OrthoFinder output from all 47 species
Zm00001e009570_P001 CESA6, PRC1,... catalytic component CesA of cellulose synthase complex 0.03 OrthoFinder output from all 47 species
Zm00001e009843_P002 MUR10, ATCESA7,... catalytic component CesA of cellulose synthase complex 0.04 OrthoFinder output from all 47 species
Zm00001e019828_P001 CESA8, LEW2,... catalytic component CesA of cellulose synthase complex 0.04 OrthoFinder output from all 47 species
Zm00001e021697_P002 ATCSLD2, CSLD2,... mannan synthase (CSLD). D-glucan synthase (CSLF) 0.02 OrthoFinder output from all 47 species
Zm00001e026711_P001 AtCESA1, RSW1,... catalytic component CesA of cellulose synthase complex 0.03 OrthoFinder output from all 47 species
Zm00001e031187_P001 AtCESA1, RSW1,... catalytic component CesA of cellulose synthase complex 0.03 OrthoFinder output from all 47 species
Zm00001e033093_P003 IXR1, CEV1,... catalytic component CesA of cellulose synthase complex 0.03 OrthoFinder output from all 47 species
Zm00001e033375_P001 ATH-A, CESA2,... catalytic component CesA of cellulose synthase complex 0.04 OrthoFinder output from all 47 species
Zm00001e034187_P001 MUR10, ATCESA7,... catalytic component CesA of cellulose synthase complex 0.04 OrthoFinder output from all 47 species
Zm00001e036680_P001 ATCSLD3, KJK,... mannan synthase (CSLD) 0.03 OrthoFinder output from all 47 species
Zm00001e037015_P002 CSLD1, ATCSLD1,... mannan synthase (CSLD) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005384 manganese ion transmembrane transporter activity IEP HCCA
BP GO:0006873 cellular monoatomic ion homeostasis IEP HCCA
BP GO:0006875 cellular metal ion homeostasis IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015018 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity IEP HCCA
MF GO:0015020 glucuronosyltransferase activity IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
BP GO:0019725 cellular homeostasis IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
BP GO:0030003 cellular monoatomic cation homeostasis IEP HCCA
BP GO:0030026 cellular manganese ion homeostasis IEP HCCA
BP GO:0042592 homeostatic process IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
MF GO:0046915 transition metal ion transmembrane transporter activity IEP HCCA
BP GO:0046916 cellular transition metal ion homeostasis IEP HCCA
BP GO:0048878 chemical homeostasis IEP HCCA
BP GO:0050801 monoatomic ion homeostasis IEP HCCA
BP GO:0055065 metal ion homeostasis IEP HCCA
BP GO:0055071 manganese ion homeostasis IEP HCCA
BP GO:0055076 transition metal ion homeostasis IEP HCCA
BP GO:0055080 monoatomic cation homeostasis IEP HCCA
BP GO:0055082 cellular chemical homeostasis IEP HCCA
BP GO:0098771 inorganic ion homeostasis IEP HCCA

No InterPro domains available for this sequence

No external refs found!