Smo80895 (PACid_15408472)


Aliases : PACid_15408472

Description : 17.5.2 hormone metabolism.ethylene.signal transduction Encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family (ATERF-2). The protein contains one AP2 domain. Functions as activator of GCC boxñdependent transcription. Positive regulator of JA-responsive defense genes and resistance to F. oxysporum and enhances JA inhibition of root elongation.


Gene families : OG_01_0000000 (Gene family) Phylogenetic Tree(s): OG0000000_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Smo80895
Cluster HCCA cluster: Cluster_177

Target Alias Description ECC score Gene Family Method Actions
AT1G22190 No alias Integrase-type DNA-binding superfamily protein 0.02 Gene family
AT1G28370 ATERF11, ERF11 ERF domain protein 11 0.03 Gene family
AT1G53170 ATERF8, ATERF-8, ERF8 ethylene response factor 8 0.02 Gene family
AT1G74930 ORA47 Integrase-type DNA-binding superfamily protein 0.03 Gene family
AT3G15210 ATERF4, RAP2.5,... ethylene responsive element binding factor 4 0.03 Gene family
AT3G20310 ERF7, ATERF7, ATERF-7 ethylene response factor 7 0.05 Gene family
AT4G34410 RRTF1 redox responsive transcription factor 1 0.02 Gene family
AT4G39780 No alias Integrase-type DNA-binding superfamily protein 0.02 Gene family
AT5G05410 DREB2A, DREB2 DRE-binding protein 2A 0.02 Gene family
AT5G07310 No alias Integrase-type DNA-binding superfamily protein 0.02 Gene family
AT5G18560 PUCHI Integrase-type DNA-binding superfamily protein 0.02 Gene family
AT5G21960 No alias Integrase-type DNA-binding superfamily protein 0.02 Gene family
AT5G61890 No alias Integrase-type DNA-binding superfamily protein 0.02 Gene family
GSVIVT01013935001 No alias No description available 0.03 Gene family
GSVIVT01015037001 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.04 Gene family
GSVIVT01020584001 No alias No description available 0.03 Gene family
GSVIVT01031747001 No alias 17.5.2 hormone metabolism.ethylene.signal transduction... 0.04 Gene family
GSVIVT01032983001 No alias No description available 0.02 Gene family
GSVIVT01035502001 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
LOC_Os02g43970 Os02g0657000 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
LOC_Os02g52670 Os02g0764700 No description available 0.02 Gene family
LOC_Os02g54050 Os02g0781300 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
LOC_Os04g52090 Os04g0610400 No description available 0.02 Gene family
LOC_Os04g57340 Os04g0669200 17.5.2 hormone metabolism.ethylene.signal transduction... 0.02 Gene family
LOC_Os05g41780 Os05g0497300 17.5.2 hormone metabolism.ethylene.signal transduction... 0.02 Gene family
LOC_Os06g10780 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
LOC_Os10g25170 Os10g0390800 No description available 0.02 Gene family
MA_100577g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
MA_10062104g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
MA_10082062g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
MA_10370681g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
MA_10430850g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
MA_10431882g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
MA_10434101g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
MA_10436654g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
MA_12171g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
MA_15000g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
MA_179692g0020 No alias No description available 0.03 Gene family
MA_203191g0010 No alias No description available 0.02 Gene family
MA_214532g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
MA_256188g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
MA_27309g0010 No alias No description available 0.05 Gene family
MA_4032g0010 No alias No description available 0.04 Gene family
MA_42369g0010 No alias No description available 0.04 Gene family
MA_426919g0020 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
MA_463250g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
MA_5306433g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
MA_540404g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
MA_67707g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
MA_7168929g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
MA_81029g0010 No alias No description available 0.02 Gene family
MA_8574268g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
MA_88g0020 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
MA_8984558g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
MA_914123g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
MA_922309g0010 No alias No description available 0.02 Gene family
MA_9260020g0010 No alias No description available 0.03 Gene family
MA_9565555g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
MA_96063g0020 No alias No description available 0.02 Gene family
MA_9785986g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Solyc01g057080.1.1 Solyc01g057080.1 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Solyc01g108240.3.1 Solyc01g108240.3 No description available 0.03 Gene family
Solyc02g090770.1.1 Solyc02g090770.1 No description available 0.03 Gene family
Solyc03g093610.1.1 Solyc03g093610.1 No description available 0.03 Gene family
Solyc04g012050.3.1 Solyc04g012050.3 No description available 0.02 Gene family
Solyc04g072300.1.1 Solyc04g072300.1 No description available 0.02 Gene family
Solyc06g054630.2.1 Solyc06g054630.2 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.04 Gene family
Solyc06g063070.3.1 Solyc06g063070.3 No description available 0.02 Gene family
Solyc06g066540.1.1 Solyc06g066540.1 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Solyc06g068830.2.1 Solyc06g068830.2 No description available 0.02 Gene family
Solyc07g053740.1.1 Solyc07g053740.1 No description available 0.03 Gene family
Solyc08g078180.1.1 Solyc08g078180.1 No description available 0.02 Gene family
Solyc09g089910.1.1 Solyc09g089910.1 No description available 0.02 Gene family
Solyc09g089930.2.1 Solyc09g089930.2 No description available 0.03 Gene family
Solyc10g006130.1.1 Solyc10g006130.1 No description available 0.03 Gene family
Solyc10g050960.2.1 Solyc10g050960.2 No description available 0.02 Gene family
Solyc10g050970.1.1 Solyc10g050970.1 No description available 0.03 Gene family
Solyc11g042560.1.1 Solyc11g042560.1 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Zm00001d002364 GRMZM2G068967 No description available 0.02 Gene family
Zm00001d014113 GRMZM2G024871 17.5.3 hormone... 0.02 Gene family
Zm00001d018081 GRMZM2G055204 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Zm00001d018305 GRMZM2G110333 No description available 0.02 Gene family
Zm00001d026271 GRMZM2G438202 No description available 0.02 Gene family
Zm00001d038585 GRMZM2G020150 No description available 0.03 Gene family
Zm00001d048208 GRMZM2G113060 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Zm00001d049058 GRMZM2G073258,... No description available 0.02 Gene family

Type GO Term Name Evidence Source
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 103 153
No external refs found!