Smo80869 (PACid_15408409)


Aliases : PACid_15408409

Description : 27.3.22 RNA.regulation of transcription.HB,Homeobox transcription factor family BEL1-like homeodomain 6 (BLH6) FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription EXPRESSED IN: 21 plant structures EXPRESSED DURING: 13 growth stages CONTAINS InterPro DOMAIN/s: Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), POX (InterPro:IPR006563), Homeodomain-related (InterPro:IPR012287) BEST Arabidopsis thaliana protein match is: BEL1-like homeodomain 7 (TAIR:AT2G16400.1) Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12 Bacteria - 1396 Metazoa - 17338 Fungi - 3422 Plants - 5037 Viruses - 0 Other Eukaryotes - 2996 (source: NCBI BLink). (original description: no original description)'


Gene families : OG_01_0000167 (Gene family) Phylogenetic Tree(s): OG0000167_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Smo80869
Cluster HCCA cluster: Cluster_80

Target Alias Description ECC score Gene Family Method Actions
AT1G19700 BEL10, BLH10 BEL1-like homeodomain 10 0.03 Gene family
AT1G75410 BLH3 BEL1-like homeodomain 3 0.02 Gene family
AT1G75430 BLH11 BEL1-like homeodomain 11 0.02 Gene family
AT2G27220 BLH5 BEL1-like homeodomain 5 0.03 Gene family
AT2G27990 BLH8, PNF BEL1-like homeodomain 8 0.03 Gene family
AT2G35940 EDA29, BLH1 BEL1-like homeodomain 1 0.03 Gene family
AT4G32980 ATH1 homeobox gene 1 0.02 Gene family
AT5G02030 VAN, BLH9, RPL,... POX (plant homeobox) family protein 0.03 Gene family
GSVIVT01016458001 No alias 34.13 transport.peptides and oligopeptides Major... 0.02 Gene family
GSVIVT01037575001 No alias 27.3.22 RNA.regulation of transcription.HB,Homeobox... 0.02 Gene family
LOC_Os03g52239 Os03g0732100 27.3.22 RNA.regulation of transcription.HB,Homeobox... 0.02 Gene family
MA_28447g0010 No alias No description available 0.02 Gene family
Solyc02g089940.3.1 Solyc02g089940.3 No description available 0.02 Gene family
Solyc04g080790.3.1 Solyc04g080790.3 27.3.22 RNA.regulation of transcription.HB,Homeobox... 0.02 Gene family
Zm00001d027802 GRMZM2G004641 27.3.22 RNA.regulation of transcription.HB,Homeobox... 0.03 Gene family
Zm00001d031182 GRMZM2G099319 27.3.22 RNA.regulation of transcription.HB,Homeobox... 0.03 Gene family
Zm00001d035907 GRMZM2G013617 No description available 0.02 Gene family

Type GO Term Name Evidence Source
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR008422 Homeobox_KN_domain 257 293
No external refs found!