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  5. Msp_g28508

Msp_g28508


Description : not classified & original description: none


Gene families : OG0002372 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002372_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g28508

Target Alias Description ECC score Gene Family Method Actions
Adi_g003770 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g004326 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g007414 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g051123 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g110160 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g30546 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g23941 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aop_g28682 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g29803 EMB2744 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g33549 MEF19 ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g68548 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dac_g43203 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Len_g17904 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g07606 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g03794 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Msp_g08531 OTP84 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Msp_g29867 No alias ssDNA-binding protein *(OSB) & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g29894 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g30795 No alias not classified & original description: none 0.13 OrthoFinder output from all 47 species
Msp_g33641 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g33944 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g47110 No alias ssDNA-binding protein *(OSB) & original description: none 0.1 OrthoFinder output from all 47 species
Nbi_g32623 OTP82 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g05532 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g57143 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g20435 VAC1, ECB2, ATECB2 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g22935 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g25557 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g48804 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g49147 VAC1, ECB2, ATECB2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g55945 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g28102 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 200 225
IPR002885 Pentatricopeptide_repeat 171 196
IPR002885 Pentatricopeptide_repeat 69 94
IPR002885 Pentatricopeptide_repeat 95 141
No external refs found!