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  5. Msp_g28478

Msp_g28478 (EMB2758)


Aliases : EMB2758

Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g28478

Target Alias Description ECC score Gene Family Method Actions
Aev_g09730 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g13795 OSB1 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g03430 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aop_g27127 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g33558 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g43404 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0008.g011626 CRR22 not classified & original description: CDS=1-2025 0.03 OrthoFinder output from all 47 species
Azfi_s0010.g012300 No alias not classified & original description: CDS=1-1938 0.03 OrthoFinder output from all 47 species
Azfi_s0077.g038002 No alias not classified & original description: CDS=1-2019 0.03 OrthoFinder output from all 47 species
Azfi_s0099.g044007 REME1 not classified & original description: CDS=1-1401 0.03 OrthoFinder output from all 47 species
Azfi_s0168.g054647 No alias not classified & original description: CDS=1-2919 0.03 OrthoFinder output from all 47 species
Azfi_s0171.g055668 No alias not classified & original description: CDS=1-711 0.03 OrthoFinder output from all 47 species
Azfi_s0544.g076391 No alias not classified & original description: CDS=1-906 0.05 OrthoFinder output from all 47 species
Azfi_s1396.g102567 No alias not classified & original description: CDS=1-1371 0.04 OrthoFinder output from all 47 species
Azfi_s4087.g117953 CRR22 not classified & original description: CDS=1-597 0.03 OrthoFinder output from all 47 species
Cba_g07008 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g11914 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g34742 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g36775 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g67706 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g05541 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g14626 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g36025 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g45110 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g15388 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g22519 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g28641 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g01382 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g18986 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g37832 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g02628 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Msp_g04492 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g17452 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g34313 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g38951 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g40180 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g27840 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g44738 VAC1, ECB2, ATECB2 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g13595 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g04988 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g22095 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g56659 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0076.g017463 No alias not classified & original description: CDS=1-2316 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0237.g026572 No alias not classified & original description: CDS=1-1578 0.03 OrthoFinder output from all 47 species
Sam_g12346 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g22788 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 22 68
IPR002885 Pentatricopeptide_repeat 126 173
IPR002885 Pentatricopeptide_repeat 100 125
No external refs found!