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  5. Msp_g28428

Msp_g28428


Description : not classified & original description: none


Gene families : OG0003479 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003479_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g28428

Target Alias Description ECC score Gene Family Method Actions
Aop_g28608 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g43985 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dde_g30992 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g03715 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Msp_g22835 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g23334 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g24343 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g30089 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g44739 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g22125 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g26361 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Spa_g40850 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g38094 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016836 hydro-lyase activity IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 41 66
IPR002885 Pentatricopeptide_repeat 67 114
No external refs found!