Msp_g28217 (VAC1, ECB2, ATECB2)


Aliases : VAC1, ECB2, ATECB2

Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g28217

Target Alias Description ECC score Gene Family Method Actions
Adi_g069207 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g11596 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g29330 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Aev_g32661 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g42281 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g42628 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g48795 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g16718 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g18876 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g06815 CRR2 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g16217 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g17982 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g25195 EMB2758 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g29297 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g30400 DOT4 ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g30728 No alias ssDNA-binding protein *(OSB) & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g33117 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g38453 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene00921.t1 CRR2, Aspi01Gene00921 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene02094.t1 Aspi01Gene02094 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene02505.t1 Aspi01Gene02505 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene05393.t1 Aspi01Gene05393 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene05589.t1 CRK8, Aspi01Gene05589 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene08612.t1 Aspi01Gene08612 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene08990.t1 OTP84, Aspi01Gene08990 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene12659.t1 Aspi01Gene12659 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene14795.t1 CRR22, Aspi01Gene14795 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene14860.t1 Aspi01Gene14860 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene20358.t1 Aspi01Gene20358 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene24209.t1 VAC1, ECB2,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene25991.t1 CRR22, Aspi01Gene25991 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene31317.t1 CRR28, Aspi01Gene31317 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene34702.t1 Aspi01Gene34702 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene34713.t1 Aspi01Gene34713 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene34786.t1 Aspi01Gene34786 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene34799.t1 Aspi01Gene34799 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene34884.t1 Aspi01Gene34884 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene41775.t1 Aspi01Gene41775 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene42294.t1 Aspi01Gene42294 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene44213.t1 Aspi01Gene44213 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene49892.t1 Aspi01Gene49892 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene52031.t2 Aspi01Gene52031 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene55895.t1 Aspi01Gene55895 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene57016.t1 Aspi01Gene57016 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene58644.t1 Aspi01Gene58644 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene64067.t1 MEF19, Aspi01Gene64067 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene64480.t1 Aspi01Gene64480 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene70449.t1 Aspi01Gene70449 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene71401.t1 REME1, Aspi01Gene71401 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g07024 OTP86 ssDNA-binding protein *(OSB) & original description: none 0.06 OrthoFinder output from all 47 species
Cba_g07721 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Cba_g07786 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g14102 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Cba_g15130 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Cba_g19909 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g34546 No alias ssDNA-binding protein *(OSB) & original description: none 0.06 OrthoFinder output from all 47 species
Cba_g38342 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g45827 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g46020 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g67793 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g69270 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Cba_g69713 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g77536 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g16108 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g18724 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g19035 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g30403 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g37654 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g08457 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g22519 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Len_g36343 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g37832 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Len_g54668 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g54934 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Msp_g03860 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g09805 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g17452 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g38951 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g04397 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g21730 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g23638 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g26158 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g22095 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g29583 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g49230 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g53953 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g59346 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g62508 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g33092 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g30543 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g47167 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g20089 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g44227 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 198 224
IPR002885 Pentatricopeptide_repeat 303 327
IPR002885 Pentatricopeptide_repeat 124 170
IPR002885 Pentatricopeptide_repeat 22 68
IPR002885 Pentatricopeptide_repeat 328 375
IPR002885 Pentatricopeptide_repeat 429 477
IPR002885 Pentatricopeptide_repeat 226 272
No external refs found!