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  5. Msp_g27338

Msp_g27338


Description : pre-60S ribosomal subunit assembly factor *(NSA1) & original description: none


Gene families : OG0005136 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005136_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g27338

Target Alias Description ECC score Gene Family Method Actions
Adi_g012116 No alias pre-60S ribosomal subunit assembly factor *(NSA1) &... 0.04 OrthoFinder output from all 47 species
Aop_g22268 No alias pre-60S ribosomal subunit assembly factor *(NSA1) &... 0.03 OrthoFinder output from all 47 species
Azfi_s0037.g025892 No alias pre-60S ribosomal subunit assembly factor *(NSA1) &... 0.05 OrthoFinder output from all 47 species
Cre17.g718650 No alias No description available 0.01 OrthoFinder output from all 47 species
Dac_g10541 No alias pre-60S ribosomal subunit assembly factor *(NSA1) &... 0.03 OrthoFinder output from all 47 species
Dde_g24156 No alias pre-60S ribosomal subunit assembly factor *(NSA1) &... 0.03 OrthoFinder output from all 47 species
Ore_g02072 No alias pre-60S ribosomal subunit assembly factor *(NSA1) &... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP HCCA
CC GO:0000152 nuclear ubiquitin ligase complex IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005680 anaphase-promoting complex IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
CC GO:0031461 cullin-RING ubiquitin ligase complex IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
CC GO:1990234 transferase complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!