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  5. Msp_g27068

Msp_g27068


Description : EC_4.1 carbon-carbon lyase & original description: none


Gene families : OG0000356 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000356_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g27068

Target Alias Description ECC score Gene Family Method Actions
Ala_g07273 SAMDC EC_4.1 carbon-carbon lyase & original description: none 0.05 OrthoFinder output from all 47 species
Als_g10247 No alias EC_4.1 carbon-carbon lyase & original description: none 0.04 OrthoFinder output from all 47 species
Als_g38176 No alias EC_4.1 carbon-carbon lyase & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g21795 No alias EC_4.1 carbon-carbon lyase & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g62652 No alias EC_4.1 carbon-carbon lyase & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.34G041400.1 SAMDC, Ceric.34G041400 EC_4.1 carbon-carbon lyase & original description:... 0.02 OrthoFinder output from all 47 species
MA_10429775g0030 No alias S-adenosyl methionine decarboxylase 0.03 OrthoFinder output from all 47 species
MA_10434945g0010 SAMDC S-adenosyl methionine decarboxylase 0.03 OrthoFinder output from all 47 species
MA_10434945g0020 SAMDC S-adenosyl methionine decarboxylase 0.06 OrthoFinder output from all 47 species
MA_9879049g0010 SAMDC S-adenosyl methionine decarboxylase 0.03 OrthoFinder output from all 47 species
Nbi_g14253 No alias EC_4.1 carbon-carbon lyase & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g07560 No alias EC_4.1 carbon-carbon lyase & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g18523 No alias EC_4.1 carbon-carbon lyase & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g22755 SAMDC EC_4.1 carbon-carbon lyase & original description: none 0.03 OrthoFinder output from all 47 species
Solyc02g089610.2.1 Solyc02g089610 S-adenosyl methionine decarboxylase 0.06 OrthoFinder output from all 47 species
Solyc05g010420.2.1 Solyc05g010420 S-adenosyl methionine decarboxylase 0.05 OrthoFinder output from all 47 species
Tin_g00861 No alias EC_4.1 carbon-carbon lyase & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e035959_P001 Zm00001e035959 ornithine decarboxylase 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR022643 De-COase2_C 678 779
IPR001985 S-AdoMet_decarboxylase 22 353
IPR022644 De-COase2_N 445 677
No external refs found!