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  5. Msp_g26712

Msp_g26712 (ATOMT1, OMT1)


Aliases : ATOMT1, OMT1

Description : EC_2.1 transferase transferring one-carbon group & original description: none


Gene families : OG0000070 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000070_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g26712

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene68558.t1 ATOMT1, OMT1,... EC_2.1 transferase transferring one-carbon group &... 0.04 OrthoFinder output from all 47 species
Cba_g37648 ATOMT1, OMT1 EC_2.1 transferase transferring one-carbon group &... 0.04 OrthoFinder output from all 47 species
GSVIVT01020631001 No alias Probable O-methyltransferase 3 OS=Humulus lupulus 0.04 OrthoFinder output from all 47 species
GSVIVT01020638001 No alias Trans-resveratrol di-O-methyltransferase OS=Vitis vinifera 0.02 OrthoFinder output from all 47 species
Gb_36958 ATOMT1, OMT1 Enzyme classification.EC_2 transferases.EC_2.1... 0.02 OrthoFinder output from all 47 species
Ore_g32237 No alias EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
Ore_g39031 ATOMT1, OMT1 EC_2.1 transferase transferring one-carbon group &... 0.02 OrthoFinder output from all 47 species
Pnu_g24870 ATOMT1, OMT1 EC_2.1 transferase transferring one-carbon group &... 0.04 OrthoFinder output from all 47 species
Pnu_g28935 ATOMT1, OMT1 EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
Tin_g40622 ATOMT1, OMT1 EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
Zm00001e009145_P001 Zm00001e009145 5-pentadecatrienyl resorcinol O-methyltransferase... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000723 telomere maintenance IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003678 DNA helicase activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0032200 telomere organization IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
InterPro domains Description Start Stop
IPR001077 O_MeTrfase_dom 203 408
IPR012967 Plant_MeTrfase_dimerisation 90 146
No external refs found!