Msp_g26671

Description : E3 ubiquitin ligase & original description: none

Gene families : OG0001662 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001662_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Msp_g26671
Cluster	HCCA: Cluster_167

Target	Alias	Description	ECC score	Gene Family Method
AT3G54790	No alias	ARM repeat superfamily protein	0.03	OrthoFinder output from all 47 species
AT5G67340	No alias	ARM repeat superfamily protein	0.03	OrthoFinder output from all 47 species
Aspi01Gene58718.t1	Aspi01Gene58718	E3 ubiquitin ligase & original description: none	0.03	OrthoFinder output from all 47 species
Azfi_s0076.g037929	No alias	E3 ubiquitin ligase & original description: CDS=24-2345	0.03	OrthoFinder output from all 47 species
Ceric.27G022700.1	Ceric.27G022700	E3 ubiquitin ligase & original description:...	0.03	OrthoFinder output from all 47 species
Dac_g09075	No alias	E3 ubiquitin ligase & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g01391	No alias	E3 ubiquitin ligase & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g24860	No alias	E3 ubiquitin ligase & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01000169001	No alias	Protein degradation.peptide tagging.Ubiquitin...	0.04	OrthoFinder output from all 47 species
MA_588533g0010	No alias	U-box domain-containing protein 4 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
Nbi_g01428	No alias	E3 ubiquitin ligase & original description: none	0.03	OrthoFinder output from all 47 species
Solyc01g014230.4.1	Solyc01g014230	U-box domain-containing protein 4 OS=Arabidopsis...	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004842	ubiquitin-protein transferase activity	IEA	Interproscan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0016567	protein ubiquitination	IEA	Interproscan
MF	GO:0016740	transferase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0019787	ubiquitin-like protein transferase activity	None	Extended
BP	GO:0032446	protein modification by small protein conjugation	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0070647	protein modification by small protein conjugation or removal	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0005515	protein binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000225	Armadillo	643	681
IPR000225	Armadillo	560	599
IPR003613	Ubox_domain	239	310

External Links

No external refs found!