Description : E3 ubiquitin ligase *(RMA/MUSE) & original description: none
Gene families : OG0000266 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000266_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Msp_g26555 | |
Cluster | HCCA: Cluster_12 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Cpa|evm.model.tig00001331.4 | No alias | Protein degradation.peptide tagging.Ubiquitin... | 0.01 | OrthoFinder output from all 47 species | |
Ehy_g25032 | No alias | E3 ubiquitin ligase *(RMA/MUSE) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Len_g06314 | No alias | E3 ubiquitin ligase *(RMA/MUSE) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Solyc10g006960.3.1 | RMA3, ATRMA3,... | RING-HC-class E3 ligase | 0.02 | OrthoFinder output from all 47 species | |
Solyc10g051270.2.1 | Solyc10g051270 | RING-HC-class E3 ligase | 0.02 | OrthoFinder output from all 47 species | |
Tin_g30114 | No alias | E3 ubiquiTin ligase *(RMA/MUSE) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e026195_P001 | Zm00001e026195 | RING-HC-class E3 ligase | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e028813_P001 | Zm00001e028813 | RING-HC-class E3 ligase | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003774 | cytoskeletal motor activity | IEP | HCCA |
MF | GO:0005509 | calcium ion binding | IEP | HCCA |
MF | GO:0005543 | phospholipid binding | IEP | HCCA |
MF | GO:0005544 | calcium-dependent phospholipid binding | IEP | HCCA |
MF | GO:0008289 | lipid binding | IEP | HCCA |
BP | GO:0016192 | vesicle-mediated transport | IEP | HCCA |
CC | GO:0016459 | myosin complex | IEP | HCCA |
BP | GO:0048193 | Golgi vesicle transport | IEP | HCCA |
No InterPro domains available for this sequence
No external refs found! |