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  5. Msp_g26128

Msp_g26128 (RNR1, ATMTRNASEII, EMB2730)


Aliases : RNR1, ATMTRNASEII, EMB2730

Description : exoribonuclease *(RNase R) & original description: none


Gene families : OG0003116 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003116_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g26128

Target Alias Description ECC score Gene Family Method Actions
Cba_g26285 RNR1,... exoribonuclease *(RNase R) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.12G013800.1 RNR1,... exoribonuclease *(RNase R) & original description:... 0.04 OrthoFinder output from all 47 species
Dac_g07138 RNR1,... exoribonuclease *(RNase R) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01034161001 RNR1,... RNA processing.organelle machineries.ribonuclease... 0.03 OrthoFinder output from all 47 species
MA_10437077g0010 RNR1,... exoribonuclease (RNase R) 0.03 OrthoFinder output from all 47 species
Ppi_g48435 RNR1,... exoribonuclease *(RNase R) & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g29508 No alias exoribonuclease *(RNase R) & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
MF GO:0004540 ribonuclease activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004386 helicase activity IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
InterPro domains Description Start Stop
IPR001900 RNase_II/R 446 741
No external refs found!