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  5. Msp_g26113

Msp_g26113 (ATNFXL1, NFXL1)


Aliases : ATNFXL1, NFXL1

Description : transcriptional repressor *(NF-X1) & original description: none


Gene families : OG0006722 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006722_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g26113

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01008482001 ATNFXL1, NFXL1 NF-X1-type zinc finger protein NFXL1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Solyc03g118420.4.1 ATNFXL1, NFXL1,... transcriptional repressor (NF-X1) 0.05 OrthoFinder output from all 47 species
Zm00001e036022_P001 ATNFXL1, NFXL1,... transcriptional repressor (NF-X1) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006753 nucleoside phosphate metabolic process IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
BP GO:0009117 nucleotide metabolic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
BP GO:0009187 cyclic nucleotide metabolic process IEP HCCA
BP GO:0009190 cyclic nucleotide biosynthetic process IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0019637 organophosphate metabolic process IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR000967 Znf_NFX1 750 767
IPR000967 Znf_NFX1 640 657
IPR000967 Znf_NFX1 512 529
IPR000967 Znf_NFX1 711 722
IPR000967 Znf_NFX1 854 875
IPR000967 Znf_NFX1 576 593
IPR000967 Znf_NFX1 458 473
IPR000967 Znf_NFX1 807 823
No external refs found!