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  5. Msp_g25980

Msp_g25980


Description : not classified & original description: none


Gene families : OG0000579 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000579_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g25980
Cluster HCCA: Cluster_117

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00060p00027040 WEB1,... Cytoskeleton.cp-actin-dependent plastid... 0.02 OrthoFinder output from all 47 species
AMTR_s00061p00194590 evm_27.TU.AmTr_v1... WEB family protein At5g55860 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AT1G45545 No alias Plant protein of unknown function (DUF827) 0.01 OrthoFinder output from all 47 species
AT5G42880 No alias Plant protein of unknown function (DUF827) 0.03 OrthoFinder output from all 47 species
Als_g35162 WEB1 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g40706 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g30649 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.02G094200.1 Ceric.02G094200 not classified & original description: pacid=50583920... 0.05 OrthoFinder output from all 47 species
Ehy_g12705 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Gb_35409 No alias WEB family protein At5g55860 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os09g28450.1 LOC_Os09g28450 Protein WEAK CHLOROPLAST MOVEMENT UNDER BLUE LIGHT 1... 0.03 OrthoFinder output from all 47 species
Ore_g34665 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc12g088830.3.1 WEB1, Solyc12g088830 component WEB1 of WEB1-PMI2 cp-actin filament... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004650 polygalacturonase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0004857 enzyme inhibitor activity IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006633 fatty acid biosynthetic process IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008171 O-methyltransferase activity IEP HCCA
MF GO:0008199 ferric iron binding IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0031267 small GTPase binding IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
MF GO:0051020 GTPase binding IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0072330 monocarboxylic acid biosynthetic process IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
MF GO:0140359 ABC-type transporter activity IEP HCCA
MF GO:0140678 molecular function inhibitor activity IEP HCCA
InterPro domains Description Start Stop
IPR008545 Web 245 690
IPR008545 Web 105 183
No external refs found!