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  5. Msp_g25783

Msp_g25783


Description : subfamily ABCG transporter & original description: none


Gene families : OG0001702 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001702_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g25783
Cluster HCCA: Cluster_19

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00009p00092310 evm_27.TU.AmTr_v1... Solute transport.primary active transport.ABC... 0.03 OrthoFinder output from all 47 species
AT2G37010 ATNAP12, NAP12 non-intrinsic ABC protein 12 0.02 OrthoFinder output from all 47 species
AT5G60740 No alias ABC transporter family protein 0.02 OrthoFinder output from all 47 species
Aspi01Gene72406.t1 Aspi01Gene72406 subfamily ABCG transporter & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.02G069600.1 Ceric.02G069600 subfamily ABCG transporter & original description:... 0.04 OrthoFinder output from all 47 species
Cre02.g112550 ATNAP12, NAP12 ABC transporter G family member 25 OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species
Cre05.g234400 ATNAP12, NAP12 Putative white-brown complex homolog protein 30... 0.02 OrthoFinder output from all 47 species
Ore_g19705 No alias subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g09024 No alias subfamily ABCG transporter & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000042 No alias subfamily ABCG transporter & original description: CDS=968-4330 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0089.g018653 No alias subfamily ABCG transporter & original description: CDS=36-3518 0.03 OrthoFinder output from all 47 species
Sam_g30136 No alias subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Solyc04g025170.4.1 Solyc04g025170 subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
Tin_g02193 No alias subfamily ABCG transporter & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e008651_P001 Zm00001e008651 subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP HCCA
MF GO:0003950 NAD+ ADP-ribosyltransferase activity IEP HCCA
MF GO:0004743 pyruvate kinase activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006090 pyruvate metabolic process IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0006096 glycolytic process IEP HCCA
BP GO:0006163 purine nucleotide metabolic process IEP HCCA
BP GO:0006165 nucleoside diphosphate phosphorylation IEP HCCA
BP GO:0006753 nucleoside phosphate metabolic process IEP HCCA
BP GO:0006757 ATP generation from ADP IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009117 nucleotide metabolic process IEP HCCA
BP GO:0009132 nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016763 pentosyltransferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0030955 potassium ion binding IEP HCCA
MF GO:0031420 alkali metal ion binding IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0046031 ADP metabolic process IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
BP GO:0046939 nucleotide phosphorylation IEP HCCA
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP HCCA
BP GO:0072521 purine-containing compound metabolic process IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:0140359 ABC-type transporter activity IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR043926 ABCG_dom 711 1120
IPR003439 ABC_transporter-like_ATP-bd 531 682
No external refs found!