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  5. Msp_g25621

Msp_g25621


Description : not classified & original description: none


Gene families : OG0014354 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0014354_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g25621

Target Alias Description ECC score Gene Family Method Actions
Als_g05674 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g19558 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g08852 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g31922 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0055.g014342 No alias not classified & original description: CDS=1-1818 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005737 cytoplasm IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016866 intramolecular transferase activity IEP HCCA
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP HCCA
BP GO:0022603 regulation of anatomical structure morphogenesis IEP HCCA
BP GO:0045765 regulation of angiogenesis IEP HCCA
BP GO:0050793 regulation of developmental process IEP HCCA
BP GO:0051239 regulation of multicellular organismal process IEP HCCA
BP GO:1901342 regulation of vasculature development IEP HCCA
BP GO:2000026 regulation of multicellular organismal development IEP HCCA
InterPro domains Description Start Stop
IPR046848 E_motif 585 629
IPR002885 Pentatricopeptide_repeat 240 287
IPR002885 Pentatricopeptide_repeat 141 186
IPR002885 Pentatricopeptide_repeat 441 467
IPR002885 Pentatricopeptide_repeat 314 336
IPR002885 Pentatricopeptide_repeat 342 367
IPR002885 Pentatricopeptide_repeat 543 566
IPR002885 Pentatricopeptide_repeat 469 499
No external refs found!