1. Home
  2. Species
  3. Microlepia speluncae
  4. Sequence
  5. Msp_g25586

Msp_g25586 (ATARFA1F, ARFA1F)


Aliases : ATARFA1F, ARFA1F

Description : ARF-GTPase *(ARF1) & original description: none


Gene families : OG0000301 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000301_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g25586

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00209290 ATARFA1B, ARFA1B Vesicle trafficking.Coat protein I (COPI) coatomer... 0.03 OrthoFinder output from all 47 species
AT5G14670 ATARFA1B, ARFA1B ADP-ribosylation factor A1B 0.01 OrthoFinder output from all 47 species
Aev_g00831 ATARFB1B, ARFB1B ARF-GTPase *(ARFA) & original description: none 0.04 OrthoFinder output from all 47 species
Als_g39673 ATARFA1F, ARFA1F not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g61133 ATARFA1F, ARFA1F ARF-GTPase *(ARF1) & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g03710 ATARFA1F, ARFA1F ARF-GTPase *(ARF1) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g07482 ATARFA1B, ARFA1B ARF-GTPase *(ARF1) & original description: none 0.01 OrthoFinder output from all 47 species
Aop_g19389 ATARFB1B, ARFB1B ARF-GTPase *(ARFA) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g27378 ATARFA1F, ARFA1F ARF-GTPase *(ARF1) & original description: none 0.01 OrthoFinder output from all 47 species
Cba_g68389 ATARFA1B, ARFA1B ARF-GTPase *(ARF1) & original description: none 0.01 OrthoFinder output from all 47 species
GSVIVT01017654001 ATARFA1F, ARFA1F Vesicle trafficking.Coat protein I (COPI) coatomer... 0.02 OrthoFinder output from all 47 species
Gb_14375 ATARFA1F, ARFA1F ARF-GTPase 0.02 OrthoFinder output from all 47 species
Len_g05534 ATARFA1F, ARFA1F ARF-GTPase *(ARF1) & original description: none 0.02 OrthoFinder output from all 47 species
MA_12637g0010 ATARFA1B, ARFA1B ARF-GTPase 0.01 OrthoFinder output from all 47 species
MA_4349g0020 ATARFA1F, ARFA1F ARF-GTPase 0.01 OrthoFinder output from all 47 species
MA_7293641g0010 ATARFB1B, ARFB1B ADP-ribosylation factor 1 OS=Oryza sativa subsp.... 0.02 OrthoFinder output from all 47 species
Msp_g41323 ATARFA1F, ARFA1F ARF-GTPase *(ARF1) & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g15667 ATARFA1F, ARFA1F ARF-GTPase *(ARF1) & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g19970 ATARFA1F, ARFA1F ARF-GTPase *(ARF1) & original description: none 0.01 OrthoFinder output from all 47 species
Ppi_g63645 ATARFA1B, ARFA1B ARF-GTPase *(ARF1) & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g16802 ATARFA1B, ARFA1B ARF-GTPase *(ARF1) & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g02993 ATARFA1F, ARFA1F ARF-GTPase *(ARF1) & original description: none 0.01 OrthoFinder output from all 47 species
Tin_g05379 ATARFA1F, ARFA1F ARF-GTPase *(ARF1) & original description: none 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
MF GO:0005525 GTP binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR006689 Small_GTPase_ARF/SAR 6 177
No external refs found!