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  5. Msp_g25374

Msp_g25374


Description : not classified & original description: none


Gene families : OG0001121 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001121_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g25374
Cluster HCCA: Cluster_151

Target Alias Description ECC score Gene Family Method Actions
Ala_g21208 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os04g49320.1 LOC_Os04g49320 Probable helicase MAGATAMA 3 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
LOC_Os04g49340.1 LOC_Os04g49340 Probable helicase MAGATAMA 3 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Spa_g18276 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e002221_P002 Zm00001e002221 Probable helicase MAGATAMA 3 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e041375_P001 Zm00001e041375 Probable helicase MAGATAMA 3 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004386 helicase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004497 monooxygenase activity IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
InterPro domains Description Start Stop
IPR041677 DNA2/NAM7_AAA_11 495 837
IPR041679 DNA2/NAM7-like_C 844 1039
No external refs found!