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  5. Msp_g25215

Msp_g25215 (CRR22)


Aliases : CRR22

Description : not classified & original description: none


Gene families : OG0015839 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0015839_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g25215

Target Alias Description ECC score Gene Family Method Actions
Als_g18240 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.39G043700.1 CRR22, Ceric.39G043700 not classified & original description: pacid=50583052... 0.03 OrthoFinder output from all 47 species
Sam_g14000 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
InterPro domains Description Start Stop
IPR046848 E_motif 596 653
IPR002885 Pentatricopeptide_repeat 551 574
IPR032867 DYW_dom 681 764
IPR002885 Pentatricopeptide_repeat 477 524
IPR002885 Pentatricopeptide_repeat 139 187
IPR002885 Pentatricopeptide_repeat 340 388
IPR002885 Pentatricopeptide_repeat 239 287
No external refs found!