1. Home
  2. Species
  3. Microlepia speluncae
  4. Sequence
  5. Msp_g25149

Msp_g25149


Description : not classified & original description: none


Gene families : OG0000686 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000686_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g25149

Target Alias Description ECC score Gene Family Method Actions
Als_g42878 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g05612 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0057.g034355 No alias not classified & original description: CDS=1-816 0.03 OrthoFinder output from all 47 species
Dac_g13705 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g08227 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g22427 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g09152 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g18101 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g15469 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g31522 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0976.g027888 No alias not classified & original description: CDS=1-375 0.03 OrthoFinder output from all 47 species
Sam_g11814 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g14321 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g23644 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g15644 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0003697 single-stranded DNA binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005643 nuclear pore IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP HCCA
BP GO:0006890 retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
BP GO:0016226 iron-sulfur cluster assembly IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
MF GO:0030976 thiamine pyrophosphate binding IEP HCCA
BP GO:0031163 metallo-sulfur cluster assembly IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
MF GO:0050997 quaternary ammonium group binding IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
CC GO:0070939 Dsl1/NZR complex IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
MF GO:1901681 sulfur compound binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!