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  5. Msp_g25031

Msp_g25031


Description : regulatory factor *(NCP/RCB) of plastid-encoded RNA polymerase activity & original description: none


Gene families : OG0004780 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004780_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g25031

Target Alias Description ECC score Gene Family Method Actions
AT4G28590 No alias FUNCTIONS IN: molecular_function unknown; INVOLVED IN:... 0.03 OrthoFinder output from all 47 species
Als_g32458 No alias regulatory factor *(NCP/RCB) of plastid-encoded RNA... 0.03 OrthoFinder output from all 47 species
MA_85974g0010 No alias Thioredoxin-like fold domain-containing protein MRL7,... 0.03 OrthoFinder output from all 47 species
Mp1g20510.1 No alias Thioredoxin-like fold domain-containing protein MRL7... 0.02 OrthoFinder output from all 47 species
Solyc02g079730.4.1 Solyc02g079730 Thioredoxin-like fold domain-containing protein MRL7,... 0.03 OrthoFinder output from all 47 species
Tin_g13854 No alias regulatory factor *(NCP/RCB) of plastid-encoded RNA... 0.03 OrthoFinder output from all 47 species
Zm00001e019402_P001 Zm00001e019402 Thioredoxin-like fold domain-containing protein MRL7... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004497 monooxygenase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
MF GO:0010277 chlorophyllide a oxygenase [overall] activity IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!