Smo78641 (PACid_15422958)


Aliases : PACid_15422958

Description : 29.1.18 protein.aa activation.glutamine-tRNA ligase ovule abortion 9 (OVA9) CONTAINS InterPro DOMAIN/s: Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain (InterPro:IPR020056), Glutamyl/glutaminyl-tRNA synthetase, class Ic, alpha-bundle domain (InterPro:IPR020061), Glutaminyl-tRNA synthetase, class Ic, non-specific RNA-binding region part 1 (InterPro:IPR007639), Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain (InterPro:IPR011035), Glutaminyl-tRNA synthetase, class Ic, non-specific RNA-binding region part 2 (InterPro:IPR007638), Glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain (InterPro:IPR020058), Glutamyl/glutaminyl-tRNA synthetase, class Ic (InterPro:IPR000924), Glutaminyl-tRNA synthetase, class Ic (InterPro:IPR004514), Glutamyl/glutaminyl-tRNA synthetase, class Ic, anti-codon binding domain (InterPro:IPR020059) BEST Arabidopsis thaliana protein match is: Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain (TAIR:AT5G19720.1). & (loc_os05g08990.1 : 796.0


Gene families : OG_01_0003185 (Gene family) Phylogenetic Tree(s): OG0003185_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Smo78641
Cluster HCCA cluster: Cluster_170

Target Alias Description ECC score Gene Family Method Actions
Smo404079 PACid_15407088 29.1.18 protein.aa activation.glutamine-tRNA ligase... 0.05 Gene family

Type GO Term Name Evidence Source
MF GO:0004812 aminoacyl-tRNA ligase activity IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR007639 Gln-tRNA-synth_Ib_RNA-bd_N 4 159
No external refs found!