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  5. Msp_g24560

Msp_g24560


Description : component *(uS10) of small ribosomal-subunit (SSU) proteome & original description: none


Gene families : OG0001982 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001982_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g24560
Cluster HCCA: Cluster_33

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00024p00105050 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.small subunit... 0.05 OrthoFinder output from all 47 species
AT3G45030 No alias Ribosomal protein S10p/S20e family protein 0.05 OrthoFinder output from all 47 species
AT3G47370 No alias Ribosomal protein S10p/S20e family protein 0.05 OrthoFinder output from all 47 species
AT5G62300 No alias Ribosomal protein S10p/S20e family protein 0.07 OrthoFinder output from all 47 species
Ala_g32242 No alias component *(uS10) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Als_g22907 No alias component *(uS10) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Aop_g23202 No alias component *(uS10) of small ribosomal-subunit (SSU)... 0.04 OrthoFinder output from all 47 species
Ceric.10G040000.1 Ceric.10G040000 component *(uS10) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000842.28 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.05 OrthoFinder output from all 47 species
Cre16.g660150 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.06 OrthoFinder output from all 47 species
Dac_g24720 No alias component *(uS10) of small ribosomal-subunit (SSU)... 0.04 OrthoFinder output from all 47 species
Dcu_g24923 No alias component *(uS10) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
LOC_Os03g14530.1 LOC_Os03g14530 component RPS20 of SSU proteome 0.05 OrthoFinder output from all 47 species
LOC_Os06g04290.1 LOC_Os06g04290 component RPS20 of SSU proteome 0.02 OrthoFinder output from all 47 species
MA_103406g0010 No alias component RPS20 of SSU proteome 0.04 OrthoFinder output from all 47 species
MA_10429759g0010 No alias component RPS20 of SSU proteome 0.05 OrthoFinder output from all 47 species
Mp2g09440.1 No alias component RPS20 of SSU proteome 0.06 OrthoFinder output from all 47 species
Sam_g23471 No alias component *(uS10) of small ribosomal-subunit (SSU)... 0.08 OrthoFinder output from all 47 species
Smo115495 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.05 OrthoFinder output from all 47 species
Solyc01g096580.3.1 Solyc01g096580 component RPS20 of SSU proteome 0.07 OrthoFinder output from all 47 species
Solyc01g096590.3.1 Solyc01g096590 component RPS20 of SSU proteome 0.06 OrthoFinder output from all 47 species
Tin_g26346 No alias component *(uS10) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Zm00001e001045_P001 Zm00001e001045 component RPS20 of SSU proteome 0.03 OrthoFinder output from all 47 species
Zm00001e036579_P001 Zm00001e036579 component RPS20 of SSU proteome 0.03 OrthoFinder output from all 47 species
Zm00001e038574_P001 Zm00001e038574 component RPS20 of SSU proteome 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0019843 rRNA binding IEP HCCA
InterPro domains Description Start Stop
IPR027486 Ribosomal_S10_dom 26 120
No external refs found!